Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3175 ATGGAATCCGAAGCCAAAAACCACATTCAAGGTCATGACCTCATTGAAAGCTATGACAAAGCTAAACAAAGATATGCTAGGAATAGAGAGGAAAAGTTGACCCCGGGTCTTCATCTTGCATCGGCTGCCGAAGCAGGAGCTATTGTTTCCTTGTGCACAAATCCTGTTTGGCTAGTGAAGACAAGATTGCAGCTTCAGACTCCTCTTCATCAGACACGACCATACTCTGGGGTTTATGATGCATTTAGGACCATAATGAGGGAAGAAGGATTTAGTGCACTTTACCGAGGGCTTGTTCCTGGTCTATTTCTGGTTGCTACTTTCTTAGGTACGGAAAGATCACCCCCTTCTGGAATTCCTGTCTCCGCCCCTGCTCATGGTGCTATTCAGTTCACAGCATACGAGGAGCTTCGTAATATTTTTGTTGATTTGAAGAGTAGGGGAAGTACAGTACACCGTGAAAACCCTGATCAACTGTTGAATTCTGTTGATTATGCTGTTCTTGGAGCATCATCGAAAATTGCTGCGATACTTCTAAGCTATCCATTTCAGGTTATACGGTCTCGATTGCAGGTGCAAAAATCTGATTACAAGGATAGGGATATTATCATTTCTAAATACTGTTTATATTTTAACTGTGCATCTTTCTCAGAACTTGACTAA 663 0.4208 MESEAKNHIQGHDLIESYDKAKQRYARNREEKLTPGLHLASAAEAGAIVSLCTNPVWLVKTRLQLQTPLHQTRPYSGVYDAFRTIMREEGFSALYRGLVPGLFLVATFLGTERSPPSGIPVSAPAHGAIQFTAYEELRNIFVDLKSRGSTVHRENPDQLLNSVDYAVLGASSKIAAILLSYPFQVIRSRLQVQKSDYKDRDIIISKYCLYFNCASFSELD* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3175 220 ProSiteProfiles Solute carrier (Solcar) repeat profile. 33 140 IPR018108 -
Lja2g3175 220 PANTHER BNAA09G07970D PROTEIN 18 106 - -
Lja2g3175 220 SUPERFAMILY Mitochondrial carrier 17 196 IPR023395 -
Lja2g3175 220 Pfam Mitochondrial carrier protein 163 200 IPR018108 -
Lja2g3175 220 Pfam Mitochondrial carrier protein 34 106 IPR018108 -
Lja2g3175 220 Gene3D Mitochondrial carrier domain 14 215 IPR023395 -
Lja2g3175 220 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 18 106 IPR044712 GO:0006862|GO:0055085
Lja2g3175 220 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 125 195 IPR044712 GO:0006862|GO:0055085
Lja2g3175 220 PANTHER BNAA09G07970D PROTEIN 125 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3175 Lja-Chr2 68068866 68076504 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g3175 18 200 Chloroplast and Mitochondria Gene Families AT2G47490 37.158 2.04e-20 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g3175 K15115 - gmx:100809599 267.7