Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3170 ATGCATTCCAAGAGTTCTAATATCAAGAGTAACTTCATACAAACACAAAGATATTCTTTCTCAAACCTTCCTCAACATCAGGGTTTTAATTTACACCAACAATATTTAAGAAGTGAAGTAGGATACTCCGCATATTGGCGCCACCATCATAACATTACTCATTACCGTTTTCACATTAGAAGAAAAATATCTGAAATTTTAAGCTCCAATTTTCACCATGGGCAAGCACAGGAGTCAATATCTGCTATTGTAAATACTGTTGAAAACGAGCTATTTAAGCATGCTGCTTCACAGGAGGAGTTTTTAAATGAACAGACCTTGTTACAACGGGTGCGAACTGAACTCAATAAGAGGAGAAGTGAAAGCCAACAACAACTTCGAAGCTCCATGTCATACAAGGCAGTCTACAACCCTATAGTTAATGCCACTAATCATAGTGCTGTGGCTGCAAATAATATGCATGACTTTCCGAATGGACCATTTAACCATTCTATTGGACATGAGCCAGTTTATCCACCTCATGAGGGGCTAGCAAGCATTACTACAATTACTGGTATGGATGAGCTCTCGCAAGTCTTTTATTCTGGTGGTGGAAGAAATCTGGCAGCTAGCACCAATTCTATTGGTTTCAGATTTCCTCAGCAACATGCAAATAATTTGGCTACAGACAATGGAAATGGCTTTCCAAATGGAGGAATACTTTACAGTTCTATTGTACATGAGCCAGTTTTTCCACCTCATGCGGGCTCAACCAGTACTTCATATACCGGTATGGATGAGCTTTCTCAAATCCTTACTGCTGGTGGTGGAAGAAATCTGGCAGCTAGCTCCAAATCAATTGATTTCAGTTTTCCTCAGCAACATGCAAATAATTTGGAGATGAATCTTAACAAATATGGAAATTGTTTGGGGACTGTCCAGAAAAATGAGCCTTTGGCTTTACATACTGCAATGGGGAAATCCCTCCAATCTGAATCTTCAAATTTGATGATCCCTCAATATGACCTCAAAGGGAAATCTACTACTTTCCAGACTAGTTCGTCCTTTGTAGATCAGAGTCAAAATTGCTGTCAAATGTCAGGGAAGAGAACACTTATGTTTTCCGGACTTCCTACAAAGCCAATCAATGATGCCCCTTCTGGTAATTCCGATGTTATGCTACGACCTACCAAAAGACTTAAACTGGAATCTGCTTCTGGTATTAATAATTCAAGCTGTTCTGAACAATGGACTCCCAAGATGTTTCAATCTTTGGCCATAAAGGAAAATGTGATTGATCTTACATCAGAGGATGATCAAACATCAGAGGATTCAAACCTCAGAAGAGATGATACAGTAGACAGCAATAACTTGGAAGCTGCCACTAGATTGAATTCTAGCATGAGTACTCTCAGAAATAATCCTATTGCTGCAGATATAGAGGACATAGATGGAAAAGCTGCAGTTTCAGATTTCATTTTGGAACAATTTAAAAGTCCTATGCATGATTCTATGAGAGATGAGATCATGAACAATGTGGTTTATGATTTGGTTGGGCAGACTTTCAAGAATCAAACGATGAACTCGAATGGCTTAGAAGCGGACCATATGTCAGAGTCAGAGGAGTCAGGCCCCAGCGGCCATGACAATGTAGACTTGAGCAACATAGAGGAAACTGTTATTAGATCAGATTCTAGAACGCATACTCTCTGCAAAGATCCAACTGCTGAAGATGCAGAGGACATAATTGGCAGAACTGGAGTTGCAGAGTGCATAGAGAATAATGTGATTAATGATAGATTTGGGCAGGCTTTTGAGAGTGAAACAATTCACTCCAAAGGCTTAGAAGTAGTTCTTGTATCAGATGATTCTGACTCTGACTCCATGAACCATGATTCCTCAGACAGCAGTAGCCCAAGCGAAACTGAAGTTACATCGAGTTCCAGTATGGATACTCTTAGCGAAGGTCCTGTTACTGCAGATGTAGAGGAGATAAATGGAAGAACTGGATTCAACTCTGCTGGGGTAAATGCTGAAAAGAAAGTCAGTGAGAAGAAAGCTGATGAAAAGATGGAATCCAAGTTCTCAAGTACAACAGTTAAAATTGTTTCCTTAACTGAGATTTTCACAAAAGATCAAATCATACAACACATTCAAAGTCTGAGGAAGCAGGCTGTTCAGAGTATACCTGGAGAAAAAACGGGAATTGCTGCCAATAAATGCCAGTTATGTACAATGGGAAATCTCTCCTTTGCACCGGTGCCGATTGATTGCTCATATTGCGCTAAGATGATCAGGCGAAACCAAAACTACTATCATACAAAACCAGAAGAATCTGATACACCGCACTGCTTTTGCACCCCGTGTTATAACAACTCTCCAGGTGACCACATCACATTCAATGAGATATCTGTTCCCAAGACACTTCTTTATAGAAAGAAAAATGATGAAGTACTTGATGAAGGGTGGGTCGAATGTAGCAAATGCGGAAAATGGCAACATGAAATATGCGCACTCTATAACAAAAAAAGAGATTTGGACTCCTGTGCTGAGTATACATGTCCTATATGCCTCTTGAAGGAAATTGAAGAAGGAGTGCATGTACCCTTACCAAAGACTTCTATTTTCGGTGTTAAGAACTTGCCAAGTACCATGCTCAGTAACCACATAGAGAAAAGACTTCGTAAGCGTCTCATGCAAGAGAAAGAAGATTGGAAAAAATTCGGAGGGACTATGAATCTTGATGAGGATTTAGCAGCAGAAAATCTTTCTGTTAAAGTAGTGTTATCTGTTGACAAAGAATTGAAAGTGATGAAGCAGTTTCTGGACATCTTTCCGGAGGAGAAATACCCTGCTGAGTTCTCTTATAGATCAAAAGTTATTCTTCTGTTTCAGCAGATTGATGGGGCAGATGTTTGCCTTTTTGCAATGTATGTCCAGGAATTTGGTGCAGAATGTGGCAATCCCAATCAGCGTTGTGTATATATTTCATACCTGGATTCTGTCAAGTATTTTAGCCCAAAAAGAGAGACCATACGGGGAGAATCTCTTCGCACCTTCGTATACCATGAGATATTGATTGGATACCTTGATTTTTGCAAGAAACGAGGTTTTACAACATGCTACATATGGGCCTGTCCTCCTAAAAAGGGTGAAGATTATATACTGTATTGTCATCCTGACACTCAGAGGACCCCAAAGAATGATAAACTACGGCACTGGTACCTTTCAATGCTAAGAAAGGCTTCTGATGAGAATATTGTGGTTGGTTTAAGCAATATATATGATCATTTCTTTGTTCCTACTGGGAAATGCAACTCCAAGGTGACTGCTTCGCGTTTGCCATACTTTGATGGGGACTACTGGTCTGCTAGTGCTATGTATGAAGCCTGTAAAATTGAAAAAGAGAGCGGAGGGGAGTACGAAAAGGCCTTGAGTAAACATGTGTCGAAAAGAGCTTTAAAGGGCATGGGAATTGTAAACCCTTCGAAAGACACTGCTAAGGACATTCTAGTGATGCAGAAGCTGGGCCACAATATTTGGCCTTCCAAGGAAAACTTCATCGTAGTTCACCTTCAGCATACATGCGTGCACTGCAAGGAAGTGATAATTTCAGGGAAGCGGTGGTTTTGCACTGAATGCAAGAACTTCCAGGAGTGTGAAAGATGTCATACTGCTGATTCACACACTTCAACTACTGGCGAGAAACACAGACTTCGTCAGGTCCTCGTGGAAGATATTCCTTTTGATACTAAAGACAATGATATCATCCTTGATAATCAATTATTTGAGAGCAGGCGTTGGTTTCTGAGCTTCTGCCACAGGAAACACTTGCAGTTTGACATGCTCCGCCGTGCCAAGTATTCCTCAATGATGATCCTCCATCAACTACAGAGCTATGCGCAGCTCACTGTCGGAACAATATGCAGCATTTGCGGTGAACCCAATTTATCCCAAGATAGCTGGAAATGTGAGATTTGCCCTGTGTTCAATTCATGCTCTGCATGTTATAAGGAGAAAGGTGCTAAGTGCCATGCACACAAGTTGAGTCAAACTGATTCAACATCACTATCTGTCCAAGGGAATGCAGAGTCAAAGCGGAAACCAATCCGGATGCAAGAACTGCTAGCTCTTATGGAGCATGTATCTCAATGCAACTCAAGTAAAACACAACCATGCTCTTATCGACACTGTCTGAAAATGAAAAAGCTGATATCCCATGCCATTAATGGCCATGATCATGGTTCTGAGGGCTGCCTACAATGTAACAGGGCACGGGTAGCTCTAATTGCTCACTCAAAGATGTGCAGAGTCTCGCAATGTCGCGTCCCATGTTGCACGACTCTGAAGAAGCGAAAATGGACAGAAACGCAATCTGAATCTGAGCATATAGAAGCTGTTCTGGAAAGCATGCGAAAAATGTGCTGA 4407 0.4093 MHSKSSNIKSNFIQTQRYSFSNLPQHQGFNLHQQYLRSEVGYSAYWRHHHNITHYRFHIRRKISEILSSNFHHGQAQESISAIVNTVENELFKHAASQEEFLNEQTLLQRVRTELNKRRSESQQQLRSSMSYKAVYNPIVNATNHSAVAANNMHDFPNGPFNHSIGHEPVYPPHEGLASITTITGMDELSQVFYSGGGRNLAASTNSIGFRFPQQHANNLATDNGNGFPNGGILYSSIVHEPVFPPHAGSTSTSYTGMDELSQILTAGGGRNLAASSKSIDFSFPQQHANNLEMNLNKYGNCLGTVQKNEPLALHTAMGKSLQSESSNLMIPQYDLKGKSTTFQTSSSFVDQSQNCCQMSGKRTLMFSGLPTKPINDAPSGNSDVMLRPTKRLKLESASGINNSSCSEQWTPKMFQSLAIKENVIDLTSEDDQTSEDSNLRRDDTVDSNNLEAATRLNSSMSTLRNNPIAADIEDIDGKAAVSDFILEQFKSPMHDSMRDEIMNNVVYDLVGQTFKNQTMNSNGLEADHMSESEESGPSGHDNVDLSNIEETVIRSDSRTHTLCKDPTAEDAEDIIGRTGVAECIENNVINDRFGQAFESETIHSKGLEVVLVSDDSDSDSMNHDSSDSSSPSETEVTSSSSMDTLSEGPVTADVEEINGRTGFNSAGVNAEKKVSEKKADEKMESKFSSTTVKIVSLTEIFTKDQIIQHIQSLRKQAVQSIPGEKTGIAANKCQLCTMGNLSFAPVPIDCSYCAKMIRRNQNYYHTKPEESDTPHCFCTPCYNNSPGDHITFNEISVPKTLLYRKKNDEVLDEGWVECSKCGKWQHEICALYNKKRDLDSCAEYTCPICLLKEIEEGVHVPLPKTSIFGVKNLPSTMLSNHIEKRLRKRLMQEKEDWKKFGGTMNLDEDLAAENLSVKVVLSVDKELKVMKQFLDIFPEEKYPAEFSYRSKVILLFQQIDGADVCLFAMYVQEFGAECGNPNQRCVYISYLDSVKYFSPKRETIRGESLRTFVYHEILIGYLDFCKKRGFTTCYIWACPPKKGEDYILYCHPDTQRTPKNDKLRHWYLSMLRKASDENIVVGLSNIYDHFFVPTGKCNSKVTASRLPYFDGDYWSASAMYEACKIEKESGGEYEKALSKHVSKRALKGMGIVNPSKDTAKDILVMQKLGHNIWPSKENFIVVHLQHTCVHCKEVIISGKRWFCTECKNFQECERCHTADSHTSTTGEKHRLRQVLVEDIPFDTKDNDIILDNQLFESRRWFLSFCHRKHLQFDMLRRAKYSSMMILHQLQSYAQLTVGTICSICGEPNLSQDSWKCEICPVFNSCSACYKEKGAKCHAHKLSQTDSTSLSVQGNAESKRKPIRMQELLALMEHVSQCNSSKTQPCSYRHCLKMKKLISHAINGHDHGSEGCLQCNRARVALIAHSKMCRVSQCRVPCCTTLKKRKWTETQSESEHIEAVLESMRKMC* 1469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3170 1468 MobiDBLite consensus disorder prediction 624 648 - -
Lja2g3170 1468 PANTHER CBP/P300-RELATED 635 1444 IPR013178 GO:0004402|GO:0006355|GO:0016573
Lja2g3170 1468 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 803 851 IPR013083 -
Lja2g3170 1468 CDD PHD_HAC_like 778 850 - -
Lja2g3170 1468 Gene3D TAZ domain 1352 1467 IPR035898 -
Lja2g3170 1468 SUPERFAMILY TAZ domain 1358 1443 IPR035898 -
Lja2g3170 1468 Pfam TAZ zinc finger 1366 1438 IPR000197 -
Lja2g3170 1468 MobiDBLite consensus disorder prediction 520 545 - -
Lja2g3170 1468 SUPERFAMILY RING/U-box 1279 1333 - -
Lja2g3170 1468 SMART KAT11_2 905 1196 IPR013178 GO:0004402|GO:0006355|GO:0016573
Lja2g3170 1468 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 868 1295 IPR031162 GO:0004402
Lja2g3170 1468 SUPERFAMILY FYVE/PHD zinc finger 813 854 IPR011011 -
Lja2g3170 1468 ProSiteProfiles Zinc finger ZZ-type profile. 1184 1240 IPR000433 GO:0008270
Lja2g3170 1468 SMART zz_5 1296 1340 IPR000433 GO:0008270
Lja2g3170 1468 SMART zz_5 1183 1228 IPR000433 GO:0008270
Lja2g3170 1468 Pfam Histone acetylation protein 912 1116 IPR013178 GO:0004402|GO:0006355|GO:0016573
Lja2g3170 1468 ProSiteProfiles Zinc finger TAZ-type profile. 1356 1442 IPR000197 -
Lja2g3170 1468 MobiDBLite consensus disorder prediction 616 651 - -
Lja2g3170 1468 PANTHER HISTONE ACETYLTRANSFERASE HAC2 635 1444 - -
Lja2g3170 1468 SUPERFAMILY RING/U-box 1164 1232 - -
Lja2g3170 1468 Gene3D - 1292 1347 IPR043145 -
Lja2g3170 1468 Gene3D - 1181 1236 IPR043145 -
Lja2g3170 1468 SMART TAZ_2 1359 1440 IPR000197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3170 Lja-Chr2 67941569 67950884 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Lja2g3170 HAT_KAT11 1.1e-27 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g3170 K04498 - aprc:113866525 1172.92