Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3169 ATGGCGGCTCCGCCGGTGGTGAGGTTCCCGATCATGGCGACGGTGAGGGCGGTTGGGGTAGCCATCAGTGTTCTTCTCCTCACTTGGGCTCTCCATTTCAGAGGAGGCCTCGCTCTTTTTTCCGACAACAAAGATCTCATCTTCAATGTTCATCCTGTGTTGATGGTGATCGGGCTTGTTTTAATCAATGGTGAAGGGATGCTTGCATATAAGACAATATCTGGAACTAAAAACTTCAAAAAAGCCGTTCATCTGGCATTTCAGCTTGTCTCCCTCATTTTGAGCTTAGTTGGTGTCTGGGCTGCTTGGAAGTTTCACATTGACAAGGGCATCGACAATTTCTACAGCCTGCATTCATGGTTGGGCCTTGCATGCCTTTTCCTATTCTCCATCCAGTGGGCTGCTGGCTTTGCTACATTTTGGTATCCAGGAGGGTCAAGAAATAGTAGAGCTGCCTTGTTGCCATGGCATGCGTTCTTTGGGATCTATATCTATGCCTTGGCTATAGCCACAGCTACTACTGGTATTTTAGAGAAGCTTACATTCCTTCAGGTGAACAAGATCATATCACGCTATTCCAATGAAGCAATGTTGGTCAATTCCTTGGGTATTTTAATCGTTATTTTAGGTGGCCTTGTTATTCTTAGACTCGTTACGCCAGCTCATGTTAGTAAAGCTGATATCTTCAGAGGAAACTAA 699 0.4535 MAAPPVVRFPIMATVRAVGVAISVLLLTWALHFRGGLALFSDNKDLIFNVHPVLMVIGLVLINGEGMLAYKTISGTKNFKKAVHLAFQLVSLILSLVGVWAAWKFHIDKGIDNFYSLHSWLGLACLFLFSIQWAAGFATFWYPGGSRNSRAALLPWHAFFGIYIYALAIATATTGILEKLTFLQVNKIISRYSNEAMLVNSLGILIVILGGLVILRLVTPAHVSKADIFRGN* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3169 232 PANTHER CYTOCHROME B561-RELATED 5 229 IPR043205 GO:0016491
Lja2g3169 232 Gene3D - 1 229 - -
Lja2g3169 232 SMART 561_7 50 176 IPR006593 -
Lja2g3169 232 ProSiteProfiles Cytochrome b561 domain profile. 14 218 IPR006593 -
Lja2g3169 232 CDD Cyt_b561_ACYB-1_like 41 184 - -
Lja2g3169 232 PANTHER B561, PUTATIVE-RELATED 5 229 - -
Lja2g3169 232 Pfam Eukaryotic cytochrome b561 50 182 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3169 Lja-Chr2 67915810 67921225 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g3169 1 227 Chloroplast and Mitochondria Gene Families AT5G38630 71.806 1.02e-119 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g3169 K08360 - gmx:100787570 372.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g3169 2 67915810 67921225 Lja2g3169 2 67915810 67921225 ECH