Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3168 ATGGATCCTTCTCGGCGTGCTCCACGCGCCGCCATCGATCCTGTTCCCAAGATCCGCCAAGTCGGGTTCTTCGCTCCCGGAGCTGCCCCACCCGAACGCTCTCAATCGGGTCCGCCTGACCCGAGCCACTCTTCCCCTCCCGTTGTTGGTGCCTCACCATCCCTCTCGCCGGTGATGATTCCGCCGCCGCGTCACCTCTCAGATAACCTCATCCTCCACGCTCGTCCGGTCGCCGCTTCGCAGCTTCGTGCTGACGCTCCGGTGTCCCCGGCGCCGTCGTCTTCGTACTCAAGCAGGATCGCCACTGCCGCCAATGGGAGCTTCTTCGACGGTAGGGGTAGCGGCGCCGGGAAGGTGGTCGCGTCTTCGTTTCCTCGCGGAGGATTTGACTTGACTGCGGTGGTGAAGGTTCCGGCAAGCGAGCTGACCACTGTTTCCGTGGTGAATGACTCGCTTGGACTTCCCGAAAAAGAAAAAGCAAACAAAGGAGGAGGGTCTGCTGTGGAAGTGAAAGACCAACCTGCTAATTCAAAACAGCAGAAACCGAAACCCTCCAAAGCTGAAAGACGTGCTCTTCAGGAAGCTCAACGAGCTGCAAAAGCTGTGGCAAAAGCTGAAGGAAATAAAGCATCTGGAACTACAACTGTGATGAATGCCAAACCAGCTAAAGCTGTAAAGTCTGCACAGAAAGTTGATAATGTAACAGTTGCAGCCTCTGAGAAGAAGGGGACTGATTGTCCACCAGAAAAGGATAGAAAGAAAGATGCCCCTCAACCACGCATGCAGTATGATGACAAGAGCAGAGTGGAGAAAGCCAAACGCCGTGCTGTGGTGAAACAAACTGAAGCGAAGAACAGAGTAGAGTTGTTCAGGCACTTACCACAATATGAACACGGGAGTCAGCTTCCAGATCTTGAGGCGAAGTTTTTCCATCTTTATTCTGTACATCCTGCTGTTTACAAGGTGGGTTTGCAGTACCTACTTGGAGATATATCTGGTGGAAATGCTCGTTGTATTGCAATGCTTCAAGCATTTCAAGAGGCCATCAAAGACTACTTGGTTCCACCCGAGAAGACTCTTGTACGAGACCTAACGGCAAAAATTAGTAGTTATGTATCATTTCTTATTGAGTGTCGACCCCTGTCAATCAGCATGGGAAATGCAATCAGATATCTCAAAAGTCGAATAGCTAAGCTACCTTTAACTGTATCCGAGTCGGAAGCAAAAACTTCTCTCCAGTCTGATATTGAGCGTTTTATAAGTGAGAAGATCATACTTGCCAACAAGGTGATAGTCAAGCTTGCTGTCACTAAAATAAGAGATGGCGATGTTCTTCTAACTTATGGGTCATCATCAGCAATTGAAATGATTCTTTTGCACGCACATGAATTAGGAAAACAATTTCGTGTCGTGGTTGTTGACTCTCGTCCAAAGCTAAGAGGGAAACTTTTACTTCGCAAGCTTGTGGAGAAAGGTCTTAGCTGTACATACACTCATATAAATGCTGTTTCCTACATAATGCATGAAGTTACTAGAGTTTTTCTGGGTGCTTCATCAGTCTTGTCTAACGGAACTGTATATTCAAGAGTTGGGACTGCATGTGTTGCAATGGTTGCTCATGCATTCCGTGTACCTGTCATAGTTTGTTGTGAGGCCTATAAATTTCATGAGAGAGTACAGCTGGATTCAATATGCTCGAATGAACTCGGTGATCCAGATATCATTTCAAATGTGCTGGGTAGAGAGGATGTCAACTACTTGGATGGTTGGGCTGATATTGAAAATCTGCAACTTTTAAATCTGATTTATGATGCGACTCCTTCAGATTATGTCTCAATGATAGTCACAGATTATGGCATGGTTCCTCCCACAAGTGTGCCTGTAATTGTAAGAGAATATGGGAAAGAACAGGTCTGGATATAA 1923 0.4706 MDPSRRAPRAAIDPVPKIRQVGFFAPGAAPPERSQSGPPDPSHSSPPVVGASPSLSPVMIPPPRHLSDNLILHARPVAASQLRADAPVSPAPSSSYSSRIATAANGSFFDGRGSGAGKVVASSFPRGGFDLTAVVKVPASELTTVSVVNDSLGLPEKEKANKGGGSAVEVKDQPANSKQQKPKPSKAERRALQEAQRAAKAVAKAEGNKASGTTTVMNAKPAKAVKSAQKVDNVTVAASEKKGTDCPPEKDRKKDAPQPRMQYDDKSRVEKAKRRAVVKQTEAKNRVELFRHLPQYEHGSQLPDLEAKFFHLYSVHPAVYKVGLQYLLGDISGGNARCIAMLQAFQEAIKDYLVPPEKTLVRDLTAKISSYVSFLIECRPLSISMGNAIRYLKSRIAKLPLTVSESEAKTSLQSDIERFISEKIILANKVIVKLAVTKIRDGDVLLTYGSSSAIEMILLHAHELGKQFRVVVVDSRPKLRGKLLLRKLVEKGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTVYSRVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLDSICSNELGDPDIISNVLGREDVNYLDGWADIENLQLLNLIYDATPSDYVSMIVTDYGMVPPTSVPVIVREYGKEQVWI* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3168 640 PANTHER TRANSLATION INITIATION FACTOR EIF-2B DELTA SUBUNIT 1 640 - -
Lja2g3168 640 Pfam Initiation factor 2 subunit family 331 623 IPR000649 GO:0044237
Lja2g3168 640 SUPERFAMILY NagB/RpiA/CoA transferase-like 313 633 IPR037171 -
Lja2g3168 640 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 1 640 - -
Lja2g3168 640 MobiDBLite consensus disorder prediction 149 273 - -
Lja2g3168 640 Gene3D - 427 633 IPR042529 -
Lja2g3168 640 MobiDBLite consensus disorder prediction 32 46 - -
Lja2g3168 640 MobiDBLite consensus disorder prediction 1 66 - -
Lja2g3168 640 MobiDBLite consensus disorder prediction 243 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3168 Lja-Chr2 67906167 67913175 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g3168 4 640 Eukaryotic Initiation Factors Gene Family AT5G38640 65.706 0.0 782
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g3168 K03680 - gmx:100775998 1017.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g3168 2 67906167 67913175 Lja2g3168 2 67906167 67913175 ECH