Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3126 ATGAATGATGCTACTGGGAAAGGTTCTTCTTGTTTGGCCATAACAGAGAAGAAGAATCAAAGGGTAGGTGGTTGCATTGGTGTTTTCTTTCAGCTTTTTGACTGGAACCGTAGCCTTACTAAGAAGAAGCTCTTCAAGAAACTTCCACCTCCTGCAGCTGGAGCAAAACAAGCTTCTTCAAAGAAGTTTAAAGGGGAAGAGAAAATGCCAAATTCCAAGCTCCACTTGATTGCTAATGAGAACAATGGAGGCTTCCCAAGTGCCAAAAAATGTGTGAATCGTGTAATAGAGGCAGAACAAAAGCAAGAAGTGCGAGTACCTGGTCTGGTTGCTAGGTTGATGGGTCTAGAGTCTATTCCAGCTTCCCGGCGAGATCGGACCAAAAAATCTTCCTTTTCTAATGGCGATGGTGAGAAGGAGTCTTTGGATGACCATGATAGGGAAAGGGTGCATTTTGAACTGGGAGTTGGAAGTGCAAAGCATGACTCAAGACCTCAAAAGCTTCAGAAAACTGGAACAGATGAGAAAAGGACAATGACTAGATTTGGAGCTGAGGCACTACAAATTAAGGGTGTTCTGTCACAAGTAAGAAAATATAATCACCATCACCATCACCACCACACATTGAAGAGCCCGCGAGTTCCTTCAGGAAAGAGTGCATCTCGACGCTCTCGGTTAATCGGAGCAGCTACGAAGATCTTGGAACCTGGGATGCAGGCTACAAACAGAGGCAAACATTCTCTTACCTCTTCCACTTCCATTTCTCCTCCCAATCCTTTGATGGGGCATAAATCTTGCAAAAATTGTGGCAATCTTCTTGATGTTGTTGAGATCTGCTCTCCAATTGTCTCAGATGTGTTCATCCCCTCTCATGAAAATGATGTAGTTCTTCTGAGAAGCCAGGAGAAGATCATAACTCTTGTTGATGAAGATGGAAAAAACAATGCACAATCTTGTAATGAATCCCTTACTAGAAGAATGCCTGTGCCTGAGAAACGGGATTCATCACGCCAACTATTTGGGGCTCAAGAGGATGATGGTGAGGCGTCTTTTGCCTTCAAACTCAAAACTCAAACACAAGAACAGGTGTTAAACAGTGAAAAAGTTTCATCTGGATCTATAATAAGTAATATGCAAGAGAAGAGGGTATTATCAGCTGGAAGCACTAAAGACTTTGTTGCTTCGAATAGAAGCCTTATTGGCCGATCTAGGATACGGTCTCCTACCAAGATGGATAGCAGCAAATTTGATCTTGAGAGAAAACCTTCTAATGTTGAAGCTATAAATTCTGGTAATTTGGTTACTGTTAAACAGAAATATGTAAGTTCTGACACACGAGGGGGGAAAAGGAGGAGTTTTGATGCTTCCTTCCGAAACAATTATAATGTCAAAAGTATACAAGGTGGTCAGCTAAACACAGATAAGATCAATGACAATAAGGTCAATGAGGCGGTTTCATATACCTTTAGTTTCCCCTCTAAGACAAAGATTGTAATACCAGCTGCAAAAGAAGAGAGAAAGAGTAATAACGAGGTTAAGACAGATTTTCAAAGACTTTCGCCTTCGACAGTAGATGCCTTAGGAGCCATTTTAGAGCAGAAGTTGAAGGAATTAAGTTGTCAAGAAAATCAGGAGTTGGCTACTTGCCGTCCACCTAAAAACTCAACTGCCATGATTCTTCAAGAATTAATATCTGTTCTTAATTTAAAGCATCTAACAAATTCTGATGATCATGCTTTCAGTGACAAGTTTGAGGCAAGTCATGTAAGATTATTAGGAACCTCTTGCAATGGTAATCATCTCAGTCCTGGATCTGTACTGGAACCTTCCTTTTCATATAGTAGTTTGGATGAAGGCTCAGCGCATGGTTTTCGCTCGGACAATCAACTGGAACAGTTGGAACATGGTGCTGAACTTTTATATTCTGCAATATCATTTGACAAAGGGAGGATGATAGGTTATGAAGTACTGGCTGAACTTGCCAACCAAATTCATAGGATGTTGCAAAGTTTAAAATCTTGTGGAATAAGATTGACAGAAAGTAACCTCATCCATATGAAAGAGGTTATCTTCAATGCTGAACTGGTTCTAGGAAATTCCACTGAGCATGGTGAGGATGGAATGTCACAACAGCTTCTCGTTTCTTGTTTTCTGCTTGGTGAACTGGACACCATGGCAAGTGATGCTATGTGGAGAGATTTCAATGGCTTTGCAGGTTTCGATGAATCTAAAGATAGAAGCCAGATTAAGGGACTTCTGTTTGATTGTGTAATAGAATATCTGGAATCAAATTGCTGCTGCCAACATTATAACAGAGTATTTCAGGCATGGACAAAACTACCTTTATGCAAGAAAGCTAAGATGTTGGCTCAAGAGGTCAAAAGTGAGGTGAAGAAGTGGTCAAGTATAGCTGGTATGTTACCTGACCAAGTAATAGAATGGGAGATGATGAGTCACTCATGGGGTAAATGGACTGATTTTACTACTGAAGCATTTGAGGTTGGTGTTGATATAGGTGGGTTTGTACTTCAAATTTTGGTTGATGAAATTGTTGAAGAGCTTTTAGATTCCTGGAGGGGGCACATTTTGAAGAACTTACCCAAATCATGCTACTAA 2616 0.406 MNDATGKGSSCLAITEKKNQRVGGCIGVFFQLFDWNRSLTKKKLFKKLPPPAAGAKQASSKKFKGEEKMPNSKLHLIANENNGGFPSAKKCVNRVIEAEQKQEVRVPGLVARLMGLESIPASRRDRTKKSSFSNGDGEKESLDDHDRERVHFELGVGSAKHDSRPQKLQKTGTDEKRTMTRFGAEALQIKGVLSQVRKYNHHHHHHHTLKSPRVPSGKSASRRSRLIGAATKILEPGMQATNRGKHSLTSSTSISPPNPLMGHKSCKNCGNLLDVVEICSPIVSDVFIPSHENDVVLLRSQEKIITLVDEDGKNNAQSCNESLTRRMPVPEKRDSSRQLFGAQEDDGEASFAFKLKTQTQEQVLNSEKVSSGSIISNMQEKRVLSAGSTKDFVASNRSLIGRSRIRSPTKMDSSKFDLERKPSNVEAINSGNLVTVKQKYVSSDTRGGKRRSFDASFRNNYNVKSIQGGQLNTDKINDNKVNEAVSYTFSFPSKTKIVIPAAKEERKSNNEVKTDFQRLSPSTVDALGAILEQKLKELSCQENQELATCRPPKNSTAMILQELISVLNLKHLTNSDDHAFSDKFEASHVRLLGTSCNGNHLSPGSVLEPSFSYSSLDEGSAHGFRSDNQLEQLEHGAELLYSAISFDKGRMIGYEVLAELANQIHRMLQSLKSCGIRLTESNLIHMKEVIFNAELVLGNSTEHGEDGMSQQLLVSCFLLGELDTMASDAMWRDFNGFAGFDESKDRSQIKGLLFDCVIEYLESNCCCQHYNRVFQAWTKLPLCKKAKMLAQEVKSEVKKWSSIAGMLPDQVIEWEMMSHSWGKWTDFTTEAFEVGVDIGGFVLQILVDEIVEELLDSWRGHILKNLPKSCY* 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3126 871 MobiDBLite consensus disorder prediction 155 174 - -
Lja2g3126 871 MobiDBLite consensus disorder prediction 199 221 - -
Lja2g3126 871 MobiDBLite consensus disorder prediction 49 68 - -
Lja2g3126 871 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 11 856 - -
Lja2g3126 871 Pfam Domain of unknown function (DUF4378) 687 849 IPR025486 -
Lja2g3126 871 Pfam DUF761-associated sequence motif 99 124 IPR032795 -
Lja2g3126 871 MobiDBLite consensus disorder prediction 121 148 - -
Lja2g3126 871 PANTHER DNAA INITIATOR-ASSOCIATING PROTEIN 11 856 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3126 Lja-Chr2 66233290 66238028 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g3126 9 854 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 30.778 9.79e-75 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g3126 - - cam:101506047 874.004
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g3126 2 66233290 66238028 Lja2g3126 2 66233290 66238028 ECH