Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3119 ATGAATAATTCTCCGAAAGAGGTTGTATCACCATTGAATTGCAACGTTAAGGGCAATCTTTCTATCCAACCCAATGCCTCCAAGGCTCCAACATCCCCGAAGCAACCTTTCTTCATTGGTGTTGCTGGCGGAACTGCATCTGGGAAAACAACTGTGTGCAACATGATAAACAATCAGCTTCATGATCAACGTCTCGTCCTCATTAATCAAGACTCATTTTACTACTCGTTGAGTGAGGAAGAGCTACATAAAGTTAATGAGTACAACTTTGATCATCCTGATGCCTTTGATATTGCACTTATGCTTTTAATCATGGAGAAGTTAAAACATGGACAAGAAGTTACCATACCAAATTATGATATTAGTGGCCATAAGAGAACTGAACCAGAACGACAGGTTCACCCTGCAGACATCATAATTTTAGAAGGAATATTAGTTCTTCATGATCCTCGTGTTCGTGATATTTTGAACATGAAGATTTTTGTTGATGAAGATTCTGATGTGCGTCTTGCACGAAGGATTCAACGTCTCTCTATTGAACGTGGGAGGAACATTAAAAATGTTCTAGATCAATATTCCAGATTTGTAAAGCCCAGTTTTGAAGATTTTGTAATGCCAACAAAAAAATACGCGGATATAATCATTCCAGGTGGAGGAGATAATGATGTAGCTGTTGACTTGATAGTACAAAATATACGCACAAAGCTTGGCCAGCATGATTTGTGTAAAATATATCCAAATATTTTTGCTATTGCTTCAAATTTTCAGATAAAGGGAATGCATACTCTCATTCGTGATTCTAGAACAACAAAGCATGATTTTGTCTTTTATTCAGATCGTCTAATTAGGCTGGTCGTCGAACATGGATTGGGTCATCTTCCTTTTACTGAAAAGCAGGTCATGACACCAACAGGAGTTGTATACTCTGGTGTAGTTTTCTGCAGCAGGTTGTGCGGTGTATCAGTTATTAGAAGTGGAGAAAGCATGGAAAATGCATTAAGAGCATGTTGTAAAGGAATCAAAATTGGAAAAATCCTTATTCATGGACAAGGCACGAATGGTCGACAGTTAATTTACGAGAAGCTCCCCAAAGACATTGCTAGTCGCCATGTGTTGCTACTTGATCCAGTTCTCGCTACAGGAAATTCTGCAGTTAAAGCTATTACTCTACTTCTTAAGAAGGGTGTCCCAGAATCAAACATCATATTTCTAAATTTAATAGCAGCACCACAAGGAATAAATGAAGTTTGTGGGAGATTTCCAATGCTAAAACTTGTGACATCAGAGATTGATGCGTCACTAAATGAGAATTCTCGTGTGATACCTGGGTTGGGTGAGTTTGGCGATCGTTACTTTGCCACTGATGATTAG 1371 0.3851 MNNSPKEVVSPLNCNVKGNLSIQPNASKAPTSPKQPFFIGVAGGTASGKTTVCNMINNQLHDQRLVLINQDSFYYSLSEEELHKVNEYNFDHPDAFDIALMLLIMEKLKHGQEVTIPNYDISGHKRTEPERQVHPADIIILEGILVLHDPRVRDILNMKIFVDEDSDVRLARRIQRLSIERGRNIKNVLDQYSRFVKPSFEDFVMPTKKYADIIIPGGGDNDVAVDLIVQNIRTKLGQHDLCKIYPNIFAIASNFQIKGMHTLIRDSRTTKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVMTPTGVVYSGVVFCSRLCGVSVIRSGESMENALRACCKGIKIGKILIHGQGTNGRQLIYEKLPKDIASRHVLLLDPVLATGNSAVKAITLLLKKGVPESNIIFLNLIAAPQGINEVCGRFPMLKLVTSEIDASLNENSRVIPGLGEFGDRYFATDD* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3119 456 Gene3D - 32 238 IPR027417 -
Lja2g3119 456 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 228 IPR027417 -
Lja2g3119 456 Pfam Uracil phosphoribosyltransferase 253 454 - -
Lja2g3119 456 Gene3D - 239 454 IPR029057 -
Lja2g3119 456 CDD UMPK 38 235 IPR000764 -
Lja2g3119 456 SUPERFAMILY PRTase-like 238 454 IPR029057 -
Lja2g3119 456 PRINTS Uridine kinase signature 167 177 - -
Lja2g3119 456 PRINTS Uridine kinase signature 66 77 - -
Lja2g3119 456 PRINTS Uridine kinase signature 111 126 - -
Lja2g3119 456 PRINTS Uridine kinase signature 203 216 - -
Lja2g3119 456 PRINTS Uridine kinase signature 181 192 - -
Lja2g3119 456 PRINTS Uridine kinase signature 36 53 - -
Lja2g3119 456 PANTHER URIDINE KINASE-LIKE PROTEIN 5 19 452 - -
Lja2g3119 456 PANTHER URIDINE KINASE 19 452 - -
Lja2g3119 456 TIGRFAM udk: uridine kinase 37 235 IPR000764 -
Lja2g3119 456 CDD PRTases_typeI 317 427 IPR000836 -
Lja2g3119 456 Pfam Phosphoribulokinase / Uridine kinase family 38 224 IPR006083 GO:0005524|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3119 Lja-Chr2 65935501 65946690 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g3119 15 456 PRT Gene Family AT4G26510 72.545 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g3119 K00876 - csin:114323087 686.797