Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3115 ATGGCAAAGAAGGAGCAGAAACGCCATTCTCCTCTCCCTGTCCCAGATCCGTCTTCCTCCTCCGATTCAGAGGAACAACATGCAGCAGCAGCAGCAGCAGCAGCCGAGGAAGAAGAACAAGAACAAGTTCAAGTTCAGGTTTCGTCTGAGGAGGAGGATGTGGAGGAAGAACAACAACCCCAACCCGATGCCGACTCCGACTCCGACTCCGACCTGCCCCCAACCGCTCGTAGATCGGAAGCCAAGCGCGCTGCCGAGAACAATGCTGACGCCGAACGGGCCACGAACAAGAAGAACAAGGCTGTCGTTGTCGACACCGTCGACGCTGACGCCAAGAAGCGGTTTCTGAGAGTGTGGAGTGTTGAGGATGAGACGGCCATTCTGAAGGGCCTTGCTGAGTTCATTTCGAAAACAGGGAATGACCCGTTGAAGTACGGTGATGCATTTTACGATTTCATGAAGGATTCGCTTCAAGTGAATTCTAACACCAAGCATCTCATGCAGAAGGTTCGGAGGCTCAAGTACAAGTTTCTGAATCATGTTGATGGAACCTATTTCCACAAAGACCACTTTGATTTATGCAAGATTATATGGGGGAGTCCTGAAGCCAAACCCAAAGTCAAAGCTAAATCCACATCCAAATCCAAATCCACTAACACTGCAGCAGCAGAAGAAAAGCCAAACTCCGAGCAAGGGGTGGACAGTGATGTACTTTTGAGGAGTTTAATGATTGGTTATGAGAATATGGGTGTGAAACTGAATGAAGATGTGGTGAAGAAGGGATTGGAGTTGATTGGAGCATCTAAGAGGGCTGAGTTGGCGGGAAGGTGGAAGAAGATAGAGGTTGCGGAGCTGGAGCTGTTTGCTAAGCGTGCTCAACTGATTGAGGAGCAGACTAGGTTGATTTTGGAGGCGAACAAATCATCAAACAATTAG 936 0.4904 MAKKEQKRHSPLPVPDPSSSSDSEEQHAAAAAAAAEEEEQEQVQVQVSSEEEDVEEEQQPQPDADSDSDSDLPPTARRSEAKRAAENNADAERATNKKNKAVVVDTVDADAKKRFLRVWSVEDETAILKGLAEFISKTGNDPLKYGDAFYDFMKDSLQVNSNTKHLMQKVRRLKYKFLNHVDGTYFHKDHFDLCKIIWGSPEAKPKVKAKSTSKSKSTNTAAAEEKPNSEQGVDSDVLLRSLMIGYENMGVKLNEDVVKKGLELIGASKRAELAGRWKKIEVAELELFAKRAQLIEEQTRLILEANKSSNN* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3115 311 Coils Coil 33 53 - -
Lja2g3115 311 MobiDBLite consensus disorder prediction 212 226 - -
Lja2g3115 311 PANTHER BNAANNG10740D PROTEIN-RELATED 19 308 IPR007592 GO:0006355
Lja2g3115 311 PANTHER STOREKEEPER PROTEIN 19 308 - -
Lja2g3115 311 MobiDBLite consensus disorder prediction 70 97 - -
Lja2g3115 311 MobiDBLite consensus disorder prediction 43 64 - -
Lja2g3115 311 Pfam Protein of unknown function, DUF573 116 199 IPR007592 GO:0006355
Lja2g3115 311 MobiDBLite consensus disorder prediction 1 97 - -
Lja2g3115 311 MobiDBLite consensus disorder prediction 207 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3115 Lja-Chr2 65789193 65791190 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g3115 110 308 GeBP Transcription Factor Family AT4G25210 29.958 3.92e-15 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Lja2g3115 DUF573 3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g3115 - - lja:Lj0g3v0291669.1 186.808