Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3056 ATGCCGAGCGTCGCCGTTAAGCTCTATAGCGTGTTCTTCAAGTTTCTCTTGAAGAACCGTTTACAGAACCGGATCCAAGACCCGCCTGAAAAATCCGACCCGTTTGGCGTCACTACCCGACCCGACGAATCCATCGCCGCTCCTAACCCTTCTTTCACCGACGGCGTCGCCACCAAAGACATTCACATTGACCCCTTCACTTCCCTCTCTATCCGAATCTTCCTTCCCGAATCCGCACTCGCCTCGCCCGAACGGCGGAACAGTTACGGCCCTCCGGGGACACCGGCGACGGAGGATCCGAGGAGGAAAAGCGTAAGCGACACCGGCAGCGAGGGGTACCGAGGCTATGCGCCGGCGGTGGATGATCGCCGGAGGAAACTGCCGGTGATGTTGCAGTTTCACGGCGGTGGTTGGGTGAGCGGGAGCAACGACTCGGTGGCGAACGACTTATTCTGCCGACGGATGGCCAAGCTCTGCGATGCGGTGGTTGTTGCGGTCGGGTATCGGTTGGCGCCGGAGAATCGGTACCCGGCGGCGTTTGAGGATGGGTTGAAGGTGCTGCATTGGCTGGCGAAGCAGGCGAATTTGGCGGATTGTAGGAAGTCTTTGGGGGTCAAGAAATCGTTGGATGGTGGTCATAGGCATATTGTTGATTCGTTCGGAGCTTCTGTGGTTGAGCCATGGTTGGCTGCTCATGGTAATCCATCAAGGTGTGTTCTTCTTGGTGTGAGTTGTGGAGCAAATATTGCAGATTATGTGGCTCGAAAAGCTGTAGAAGCTGGAAAACTTCTGGACCCTGTCAAGGTGGTAGCACAGGTCCTGATGTATCCATTTTTTTGTTGGAACTCATGGAAACTATTCCTACCTGAGGAAGAATTTAGCCTGGACCATCCAGCCGCCAATCCCCTAGTTCCAGGCCTCCTTCCTCCTTTAAAGCTAATGCCTCCAACACTGACGGTGGTTGCCGAACTTGATTGGATGAGGGACCGTGCCATTGCTTACTCAGAGGAGCTTAGGAAGGTGAATGTTGATGCACCTGTTCTTGAGTATAAGGACGCAGTCCATGAATTTGCAACACTTGACATGCTTCTCAGAACCCCACAGGTGCAGGTTTGTGCAGAGGATATTGCCATCTGGGTCAAGAAATATATTTCATTTCGAGGTCATGAATTCTCATATTGA 1182 0.5313 MPSVAVKLYSVFFKFLLKNRLQNRIQDPPEKSDPFGVTTRPDESIAAPNPSFTDGVATKDIHIDPFTSLSIRIFLPESALASPERRNSYGPPGTPATEDPRRKSVSDTGSEGYRGYAPAVDDRRRKLPVMLQFHGGGWVSGSNDSVANDLFCRRMAKLCDAVVVAVGYRLAPENRYPAAFEDGLKVLHWLAKQANLADCRKSLGVKKSLDGGHRHIVDSFGASVVEPWLAAHGNPSRCVLLGVSCGANIADYVARKAVEAGKLLDPVKVVAQVLMYPFFCWNSWKLFLPEEEFSLDHPAANPLVPGLLPPLKLMPPTLTVVAELDWMRDRAIAYSEELRKVNVDAPVLEYKDAVHEFATLDMLLRTPQVQVCAEDIAIWVKKYISFRGHEFSY* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3056 393 Pfam alpha/beta hydrolase fold 284 358 IPR013094 GO:0016787
Lja2g3056 393 Pfam alpha/beta hydrolase fold 130 278 IPR013094 GO:0016787
Lja2g3056 393 PANTHER CARBOXYLESTERASE 16-RELATED 282 373 - -
Lja2g3056 393 PANTHER CARBOXYLESTERASE 16-RELATED 105 280 - -
Lja2g3056 393 PANTHER ARYLACETAMIDE DEACETYLASE 22 92 - -
Lja2g3056 393 PANTHER ARYLACETAMIDE DEACETYLASE 282 373 - -
Lja2g3056 393 PANTHER ARYLACETAMIDE DEACETYLASE 105 280 - -
Lja2g3056 393 MobiDBLite consensus disorder prediction 25 51 - -
Lja2g3056 393 SUPERFAMILY alpha/beta-Hydrolases 29 384 IPR029058 -
Lja2g3056 393 PANTHER CARBOXYLESTERASE 16-RELATED 22 92 - -
Lja2g3056 393 Gene3D alpha/beta hydrolase 35 387 IPR029058 -
Lja2g3056 393 MobiDBLite consensus disorder prediction 82 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3056 Lja-Chr2 62851749 62855201 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g3056 1 393 Carbohydrate Esterase AT3G27320 71.494 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g3056 - - gmx:100809142 605.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g3056 2 62851749 62855201 Lja2g3056 2 62851749 62855201 ECH