Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3048 ATGGAAGAGGACGGGAAAATGCCCGACAACGACTCCAAGAAGCCGTTTAGAAAATTGTGGTGCGACGAGGACGAGATCACCATTCTCAAGGGCCTTCCTGATTTCATTTCGAAAACTGGAAATGACCCGTTGAAGTACGTTGATGCTTTTTACGATTTCGTTATCAAGTCACTTCAAGTGGATGCTAACCGCGCCCAGCTGAAGGATAAGGTTCGAAGGCTGAAGAAGAAGTTCGAGACACATGCATGCAAAGGGAAGAACGGAGAGAGCCCCAAATTCCCCAAAGCCCACGACCAGAAAGCTTTTGAATTGGCCAACAAGGTATGGGGCAAGGAAAAGCCAAAGTCTAATGGTAAACCTCCCAAGAAGGAAGCCAATAGTAGCAGCAAGAACGTGGCTTCTTCTGCAAAGAAAGCGAAAGCCGAAGCTAGACAGGAACCACCACCACCGGAATCCGATATGCAAGATGTAAAGGCTGATGATACAAGTGTGCTTTTGAGTGAAATGTCTGGGCTGAATGAGGATGTGGTGAAGAAGGGATTGGAGTTAATTGGAGCATCTAAGAGGGCTCAGTTGGCGGGAAGGTGGAAGAAGATACAGGTTGCGGAGCTGGAGCTGTTTGCTAAGCGTGCTCAACTGGTTGAGGAGCAGACTAGGTTGATTTTGGAGGCTTACAAGTCATCAAAGAATTAG 693 0.4747 MEEDGKMPDNDSKKPFRKLWCDEDEITILKGLPDFISKTGNDPLKYVDAFYDFVIKSLQVDANRAQLKDKVRRLKKKFETHACKGKNGESPKFPKAHDQKAFELANKVWGKEKPKSNGKPPKKEANSSSKNVASSAKKAKAEARQEPPPPESDMQDVKADDTSVLLSEMSGLNEDVVKKGLELIGASKRAQLAGRWKKIQVAELELFAKRAQLVEEQTRLILEAYKSSKN* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3048 230 MobiDBLite consensus disorder prediction 121 135 - -
Lja2g3048 230 Pfam Protein of unknown function, DUF573 16 110 IPR007592 GO:0006355
Lja2g3048 230 PANTHER STOREKEEPER PROTEIN 12 228 - -
Lja2g3048 230 MobiDBLite consensus disorder prediction 137 158 - -
Lja2g3048 230 MobiDBLite consensus disorder prediction 105 120 - -
Lja2g3048 230 PANTHER BNAANNG10740D PROTEIN-RELATED 12 228 IPR007592 GO:0006355
Lja2g3048 230 Coils Coil 57 84 - -
Lja2g3048 230 MobiDBLite consensus disorder prediction 105 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3048 Lja-Chr2 62677618 62678341 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g3048 6 227 GeBP Transcription Factor Family AT4G25210 32.083 9.96e-27 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Lja2g3048 DUF573 3.7e-29 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g3048 - - lja:Lj0g3v0291669.1 376.326