Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3035 ATGCTGAAGCATAACAATGTCATCCCTAACGGACACTTCCGTAAGCATGGGCAGAACTATGTAAAGACCTGGTTCAATCAACCTGCCCGCAAGACAAGAAGACGTATAGCTCCTCAGAAGAAGGCTGTTAAGATTTTCCCCACGCCTACTGCTGGTCCTCTCAGATCTATGGTTCATGGACAGAGCTGGCAAAGGATTTTCTCTTGA 207 0.4686 MLKHNNVIPNGHFRKHGQNYVKTWFNQPARKTRRRIAPQKKAVKIFPTPTAGPLRSMVHGQSWQRIFS* 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3035 68 Pfam Ribosomal protein L13e 7 62 IPR001380 GO:0003735|GO:0005840|GO:0006412
Lja2g3035 68 PANTHER 60S RIBOSOMAL PROTEIN L13 2 63 - -
Lja2g3035 68 PANTHER 60S RIBOSOMAL PROTEIN L13 2 63 IPR001380 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3035 Lja-Chr2 61611427 61611775 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g3035 2 64 Cytoplasmic Ribosomal Protein Gene Family AT3G49010 82.540 1.27e-33 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g3035 K02873 - oeu:111367757 120.553