Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3019 ATGGGCTACACGGTCGGCAAATATATTAATAGACAAAAACTGCCGGGGAAGGTTGCTGATTTTGGATTGACCAAACTCACAGAAGTTGGAAGTTCCTCGCATCCCACTGGTCGTCTTGTTGGAACATTTGGATACATGCCACCAGAGTATGCTCAATATGGAGATGTCTCTCCCAAAGTAGATGTGTATGCTTTTGGAGTTGTTCTTTATGAACTTATTTCTGCTAAGGAAGCAATCGTCAAGACCAGCGAATCTATTGCTGACTCAAAGGGCCTAGTAGCTTTGTTTGAAGGAGTTCTTAGTCAGCCGAATCCTACAGAAGATCTTCGCAAACTAGTGGATCAAAGGCTTGGCGATAAATACCCTGTTGATTCAGTTCACAAGATGGCTCAACTAGCCAAAGCATGCACACATGACAATCCACAACTGCGTCCAAGTATGAGATCCATTGTGGTTGCCTTATGA 465 0.4366 MGYTVGKYINRQKLPGKVADFGLTKLTEVGSSSHPTGRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKTSESIADSKGLVALFEGVLSQPNPTEDLRKLVDQRLGDKYPVDSVHKMAQLAKACTHDNPQLRPSMRSIVVAL* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3019 154 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 13 154 IPR044812 GO:0019199|GO:0045087
Lja2g3019 154 SUPERFAMILY Protein kinase-like (PK-like) 17 151 IPR011009 -
Lja2g3019 154 Pfam Protein kinase domain 17 151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g3019 154 Gene3D Transferase(Phosphotransferase) domain 1 10 154 - -
Lja2g3019 154 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1 13 154 - -
Lja2g3019 154 ProSiteProfiles Protein kinase domain profile. 1 154 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3019 Lja-Chr2 60520761 60522494 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g3019 12 154 Receptor kinase-like Gene Family AT3G21630 64.336 2.71e-54 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lja2g3019 Pkinase 1.7e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g3019 K13429 - gmx:100777781 252.292