Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2995 ATGGAAGATCAGGAGGGTGAGTCTCCGGACCCAAACAGTCCGACCCAAGGCTCCTCCTCCTCTGAGTCTCGGACCGGGCCAGTGAGGTCACGGTGGACGCCTAAGCCAGAACAAATCCTCATACTTGAGTCCATCTTCAACAGCGGCATGGTAAACCCGCCAAAGGAAGAGACTTTCAGAATAAGAAAGCTTCTTGAGAAATTCGGCACCGTTGGCGATGCTAACGTGTTCTACTGGTTCCAGAACCGCCGCTCTCGCTCCCGTCGCCGCCAACGCCAAATGCAGGCGTCGGCAGCTCAACATGGCGGTGGTGCAAACCCATTTCCTCAGCACACCTTCAACAACAACATCAACTCTGCAAGTTCTGCTGCTGCTGCCAAAGGTTTTGGTGCTTCATCTTTCACTGTTAATTCTTCTTCACCTTACTTCTCTGGTTCCTCTTCATCATGCGGTGGTGGTAGTGGTGGTGGTTTTCAAGAAGCCTTAGGTGGTAGTTTCTTCTCAGACTCTGCTCAAATGGGTTTCCCAGAAATTGATCACAACTCAGCTGCATCATCAGTTTTGTATCCTTCTGATCATGCTCAAAATGTGAACTACAACTCAGGATATGGGAGGAATAACATTTCAGGATTCATCACAGTGTTTATCAACGGGGTAGCAACAGAAGTTCCAAGGGGCCCAATGGACATCAAAACAGTGTTTGGTGAAGATGGAATGTTAGTTCTCTCCTCTGGTTTGTCACTTCCAACCAATGAATATGGTTTCTTGATGCAGAGCTTGGAGCATGGTGAAAGCTACTTTCTGGTTTCAAAGCAAACACAAGTATGA 828 0.4807 MEDQEGESPDPNSPTQGSSSSESRTGPVRSRWTPKPEQILILESIFNSGMVNPPKEETFRIRKLLEKFGTVGDANVFYWFQNRRSRSRRRQRQMQASAAQHGGGANPFPQHTFNNNINSASSAAAAKGFGASSFTVNSSSPYFSGSSSSCGGGSGGGFQEALGGSFFSDSAQMGFPEIDHNSAASSVLYPSDHAQNVNYNSGYGRNNISGFITVFINGVATEVPRGPMDIKTVFGEDGMLVLSSGLSLPTNEYGFLMQSLEHGESYFLVSKQTQV* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2995 275 SUPERFAMILY Homeodomain-like 22 96 IPR009057 -
Lja2g2995 275 MobiDBLite consensus disorder prediction 84 111 - -
Lja2g2995 275 PANTHER WUSCHEL-RELATED HOMEOBOX 11 5 272 - -
Lja2g2995 275 PANTHER WUSCHEL-RELATED HOMEOBOX 11 5 272 IPR044558 GO:0003700|GO:0048830
Lja2g2995 275 Pfam Homeodomain 29 89 IPR001356 GO:0003677
Lja2g2995 275 MobiDBLite consensus disorder prediction 1 34 - -
Lja2g2995 275 Gene3D - 29 96 - -
Lja2g2995 275 ProSiteProfiles 'Homeobox' domain profile. 25 90 IPR001356 GO:0003677
Lja2g2995 275 MobiDBLite consensus disorder prediction 8 28 - -
Lja2g2995 275 SMART HOX_1 27 94 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2995 Lja-Chr2 57990395 57993603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2995 3 275 Wox Gene Family AT3G03660 52.595 5.35e-68 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lja2g2995 Homeodomain 7.2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2995 - - lang:109335690 303.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2995 2 57990395 57993603 Lja2g2995 2 57990395 57993603 ECH