Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2985 ATGTCTATCACAGTTCCTCTGTCCAAACACAAGGGTTACTACACCTTGTTCCTGAACACCTCCTTTCTCCTATTGATTTGTGCTTTCATGATTACTCACTTCCACACTGCAAAAATTGATGTGGTGGTGAGTAACAACTCCGGTTTTCATGATGGTAGCGAAAAAGAACAGGACTGCAAGAGCTTAGACAACATAGCTGACTACAAAGCCCAGTGCTTGTACCTTAAATCCCATGACCCATGTGTCTCTGAGGGATATATTGATTACCTTTACCTTTTCCATTGCCAATTTGGGAGATTCCCTCTATTGGGTTACACTCTTTTGTTTCTCTGGCTCCTTGTTCTGTTTTATCTCTTGGCTAGTACAACTTCTGAGTATTTTTGTCCTTCCCTGGAAAACCTCTCTAAATTGCTGAGATTGTCACCTACAATTGCGGGAGTGACTCTTCTCTCTCTTGGAAATGGTGCGCCTGATGTTTTCTCCAGCCTTGTCTCTTTCCAGGGTACTGGGACCCAGAGCATTGGCTTGAACATGGTTCTTGGAGGGGTTTCTTTTGTTTCATGTGTTGTGGTTGGAGTAGTGAGTATTTCAATAAGGCACAGGGGGGTTCAAGTTATGAAATATGCTTTTGTAAGAGATGTTTGTTTTCTTCTTATGGTTCTCATGTGCTTGTCATGTGTTTTGATTGCTGGTGAGATTGATGTTTTTGGAGCAATTGGTTTTTGTTTGATATATGGGGTGTATGTGATTGTGGTTTATGTCTCTTCTACGCGATGGAAGGAAGGTGGTGGTGGTGGTGATGCCGAAAATGGTTGTATTTCAAGTTACGGTGATGACTTGAGTTTTAGTGTCCCTCTTCTCATAGATGTGAAGGAAGGATCTATTGATTGTGTTCAAAATGTTATTGAAGAGTATGACCTGAATTTTGATAAGAGTTGTTGTCGCTTGAGATCTTCGATTTGTCGAATATTGCTTTATGTTCTTGAGATGCCCCTTTATTTGCCAAGGAGATTGACAATTCCTGTTGTATGTGAAGAGAAATGGTCAAAGCTGTATGCAGTTTCTTCAGTGGTATTAGCACCACTTCTTTTGTGTGTTTTGTGGAACCCTCCCACAGGAAACAGTTTCTTCAGTACAAACCATATTGTTGTTTATGGAATTGCATCCTTGGTTGGCCTTGTGTTTGGTGTAACTTCATTTTTCGCAACCGAAATGACACTGCCACCAAAGAGGTGCTTATATCCTTGGCTTGCAGGAGGGTTTGTAATGAGTGTGGCATGGAGTTACATTATAGCTCAGGAGCTAGTAGGATTGTTGGTTTCAATTGGGCACATTTGCGGAATTAGTCCTTCAATACTAGGGTTAACAGTTCTTGCCTGGGGGAATTCACTTGGGGATTTGCTGACAAATTTAACCATGGCTCTAAATGGAGGACAAGAGGGTGCTCAAATAGCAATATCAGGTTGCTATGCTGGTCCAATCTTCAATACTGTTGTTGGGTTAGGCTTGTCTCTTGTGGCTGCAACATGGTCACAGTACCCACAATCTGTTCTGATCCCTAAAGATCCATTTCTTTGGGAGACTTTGGTGTTTTTGGTTGTTGGATTGGTTTGGGCTCTTGTGGTTTTGATTAAAAGAGATATGAAGCTTGATGGAGTCTTGGGAGGAGGGCTTTTAGTTGTTTACGTTATTTCTTTGTTTCTGAGGCTGATTCAAGAACAAGAATCTCTCCAATCTTATGACATTTAG 1749 0.4134 MSITVPLSKHKGYYTLFLNTSFLLLICAFMITHFHTAKIDVVVSNNSGFHDGSEKEQDCKSLDNIADYKAQCLYLKSHDPCVSEGYIDYLYLFHCQFGRFPLLGYTLLFLWLLVLFYLLASTTSEYFCPSLENLSKLLRLSPTIAGVTLLSLGNGAPDVFSSLVSFQGTGTQSIGLNMVLGGVSFVSCVVVGVVSISIRHRGVQVMKYAFVRDVCFLLMVLMCLSCVLIAGEIDVFGAIGFCLIYGVYVIVVYVSSTRWKEGGGGGDAENGCISSYGDDLSFSVPLLIDVKEGSIDCVQNVIEEYDLNFDKSCCRLRSSICRILLYVLEMPLYLPRRLTIPVVCEEKWSKLYAVSSVVLAPLLLCVLWNPPTGNSFFSTNHIVVYGIASLVGLVFGVTSFFATEMTLPPKRCLYPWLAGGFVMSVAWSYIIAQELVGLLVSIGHICGISPSILGLTVLAWGNSLGDLLTNLTMALNGGQEGAQIAISGCYAGPIFNTVVGLGLSLVAATWSQYPQSVLIPKDPFLWETLVFLVVGLVWALVVLIKRDMKLDGVLGGGLLVVYVISLFLRLIQEQESLQSYDI* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2985 582 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 1 578 - -
Lja2g2985 582 PANTHER CATION CALCIUM EXCHANGER 1 578 - -
Lja2g2985 582 Pfam Sodium/calcium exchanger protein 109 253 IPR004837 GO:0016021|GO:0055085
Lja2g2985 582 Pfam Sodium/calcium exchanger protein 417 569 IPR004837 GO:0016021|GO:0055085
Lja2g2985 582 Gene3D - 140 265 IPR044880 -
Lja2g2985 582 Gene3D - 352 570 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2985 Lja-Chr2 56643346 56645528 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2985 17 572 Antiporters AT5G17850 50.799 6.59e-164 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2985 K13754 - gmx:100813848 722.235