Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2984 ATGGAAGCTTTGTGCTCAAACTCCGAACCAAAACTCAGGAACCTCACTCTTGTCCTTAACATTTCTTTCCTCTTCCTCCTCTTTCTCTTCCTCAACGCTCATTTCCACCCTTTCAATTCTAATTTTGATGCCTCAAAAACCCTCTTCAACCATGCTCGAATACTCAGTTCTAGTGACATCATAGTTGATGCCTGCACTGACATTCACAACTTCTCTGATTATAGCTCTAAGTGCTTATATGTCAAAACTCATTCTGACTGCAGGTCAAAAGGGTACATAAACTATCTTAAAATCTTCTACTGCAGCTTTGGAAATTCCCCAATTCTGGGTCAAACACTGCTTGTGCTGTGGCTACTGGTGTTGTTCTATCTTCTAGCTGACACAGCTTCAAATTACTTTTGCAACTCCTTAGAAGGTTTGTCTGACATCTTGAAACTTTCCCCCACCATAGCGGGAGTAACCTTGCTTTCTCTGGGAAATGGCGCTCCTGACTTTTTTGCTAGTGTTGTTTCCTTCACAAGTTCTAACAATGGTGCTGTTGGCCTCAACAGCATCCTGGGAGGGGCATTTTTTGTCTCCACTGCTGTTTTGGGGATCATAAGTTTTCTATTTAGCCCAAATGAAATTGCAGTGGACAAGGCCAGTTTCATCAGAGATGTTATTTTTTTCCTTTTCTCTTTGTTCATCCTCCTCATCATCATTTCAATTGGTAAAATTACCTTGCTGGGTTCAATTTTCTATGTTTCTATATATTTCCTTTATGTTTGTGCTGTCTCTGCTACACACTTCATCTATGGAGAGGACAGAAAAGAGGCAGTGTCTTCTGATGACTTGGAAGAGTCCGGGACACCATTGCTGGGCTATGTCGACGACGACGACAATGATGATGGGAAATCAAATTTACGAAATGATTTGGGTGTTAAAGATAATGAGAGAAAGGCTGAGGGTGTTGTTGAAAATGATTTATTTCATTGGAAAGTTCTTTTGGGCAAGTTTTTTCAAGTACTAGATTTACCTCTTTATTTGCCTAGAAGACTCACTATACCAGATGTAAGTGAGGAGAAGTGGTCAAAACCATATGCTGTTATATCAGTGACATTAGCACCAGTTTTGTTTGCACTTCTTTGCAATAGCCAGATGGAAAATGTGAGTTCAAGGAGTGGTCTAGTTGCATACTTGACATCTGCTTTAATTGGCATTGTTTTGGGGAACATGGCATGTGTCACCACCAAGAGCTCTACCCCACCAAAAAAGTGTTTGTTTCCCTGGCTAGCAGGAGGGTTTTCTATGAGTGTAACATGGACTTATATCATTGCTGAGGAACTCGTTTCCCTCTTGATTTCCATTGGAAATATCATAGGGGTTAGTCCTTCAATCCTTGGATTAACTGTCCTGGCTTGGGGTAATTCTTTAGGGGATTTGATAGCCAATGGAGCAATGGCCAAAAATGGAGGAGTAGATGGGGCCCAAATTGCTGTTTCTGGGTGTTATGCAGGCCCAATGTTTAATATTCTGATGGGCTTGGGATTGCCTCTTGTTCTCTCAGCTTGGTCTGAATATCCAGACTCTTATGTCATTCCCAAAGACAATTCCCTATTTGGAATACTTGTGTTCTTGATGGTAGGGGTACTTTGGGCCCTTGTGATCATGGTGAAGAAGAATATGAAGCTTGATAAGTCCTTGGGGGCTGGACTCTTAACTATTTATCTGTGTTTTTTGTTCTTGAGGCTGGCAGTGGCAATTGGTGTTCTTCAATTGTAG 1761 0.4134 MEALCSNSEPKLRNLTLVLNISFLFLLFLFLNAHFHPFNSNFDASKTLFNHARILSSSDIIVDACTDIHNFSDYSSKCLYVKTHSDCRSKGYINYLKIFYCSFGNSPILGQTLLVLWLLVLFYLLADTASNYFCNSLEGLSDILKLSPTIAGVTLLSLGNGAPDFFASVVSFTSSNNGAVGLNSILGGAFFVSTAVLGIISFLFSPNEIAVDKASFIRDVIFFLFSLFILLIIISIGKITLLGSIFYVSIYFLYVCAVSATHFIYGEDRKEAVSSDDLEESGTPLLGYVDDDDNDDGKSNLRNDLGVKDNERKAEGVVENDLFHWKVLLGKFFQVLDLPLYLPRRLTIPDVSEEKWSKPYAVISVTLAPVLFALLCNSQMENVSSRSGLVAYLTSALIGIVLGNMACVTTKSSTPPKKCLFPWLAGGFSMSVTWTYIIAEELVSLLISIGNIIGVSPSILGLTVLAWGNSLGDLIANGAMAKNGGVDGAQIAVSGCYAGPMFNILMGLGLPLVLSAWSEYPDSYVIPKDNSLFGILVFLMVGVLWALVIMVKKNMKLDKSLGAGLLTIYLCFLFLRLAVAIGVLQL* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2984 586 Pfam Sodium/calcium exchanger protein 424 577 IPR004837 GO:0016021|GO:0055085
Lja2g2984 586 Pfam Sodium/calcium exchanger protein 115 257 IPR004837 GO:0016021|GO:0055085
Lja2g2984 586 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 7 585 - -
Lja2g2984 586 PANTHER CATION/CALCIUM EXCHANGER 1 7 585 - -
Lja2g2984 586 Gene3D - 361 578 IPR044880 -
Lja2g2984 586 Gene3D - 146 275 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2984 Lja-Chr2 56559733 56561598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2984 63 585 Antiporters AT5G17860 53.905 0.0 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2984 K13754 - gmx:100818583 809.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2984 2 56559733 56561598 Lja2g2984 2 56559733 56561598 ECH