Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2972 ATGGAAAACTATCTTAACCTTATGCAGCAAATCAGTACTATAGCTGGTAATCAAGTGCCTAGCTATTTTGTGTGGGAAGTCCTTTTTACTATGTCCATCATGGGATTGGGACTCCTTCTTTTTGCAATTCTCATTGGAAACATACAGAATTTTCTACAGGCTCTTGGGCGGAGGAAGCTGGAAATGCAACTTAGAGGTCGTGATGTTGAGCAATGGATGAGCCATCGGCGCTTACCAGTAGACCTGAGAAGGAGAGTAAGACAGGCTGAACGGTATAATTGGGCTGCAACAAGGGGGGTGAATGAAGAAATGGTTATGGAGAATCTGCCAGAAGATCTGCAGAGAGACTAA 351 0.4387 MENYLNLMQQISTIAGNQVPSYFVWEVLFTMSIMGLGLLLFAILIGNIQNFLQALGRRKLEMQLRGRDVEQWMSHRRLPVDLRRRVRQAERYNWAATRGVNEEMVMENLPEDLQRD* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2972 116 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 8 116 - -
Lja2g2972 116 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 8 116 - -
Lja2g2972 116 SUPERFAMILY Voltage-gated potassium channels 17 92 - -
Lja2g2972 116 Gene3D Helix hairpin bin 57 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2972 Lja-Chr2 55013755 55016639 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2972 8 116 Ion Channels AT3G17700 78.899 5.38e-47 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2972 K05391 - lja:Lj1g3v1135200.2 219.164