Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2955 ATGGATTTGACAGCGGAGAAGAAGGAATCAGAGAGCAACATGAACCATAACTCCGAAATCGCAGACTCTCCCTCTCAGCTTGCACCTGATGCCAACAACTACTGTAACGAAGAAGCCGAAGAGCGACAAGCACGTGACCTCAAAGCTGGCCTTCACCCCTTAAAGCACAAATTTGTATTTTGGTACACGCGGCGAAGTCCAGGAGTTCGAACTCAAACATCATATGAGGACAACATAAAGAAAATTGTTGATTTCAGTACGGTTGAAGGATTTTGGGTTTGCTATTGCCATCTTGCTCGTCCTTCTACTTTGCCTAGTCCAACAGATCTGCACCTTTTCAAAGAAGGAATTCGTCCTCTATGGGAGGACTCTGCTAACTGCAATGGTGGTAAATGGATTATACGATTCAAAAAGGTTGTCTCAGGTCGTTTTTGGGAAGACCTGGTTCTTGCCTTAGTTGGTGACCAATTGGATTATGGGGATAACATATGTGGTGCAGTACTAAGCATTCGTTTCAATGAGGATATATTGAGTGTCTGGAATCGCAATGCATCTGATCATCAGGCTGTAATGGCTCTGAGAGATTCAATCAAGCGTCACTTGAAGCTTCCTCACAGCTATGTTATGGAGTACAAGCCCCATGATGCTTCTCTGCGTGACAATTCATCTTATAGAAACACTTGGTTGAGAGGCTAG 696 0.4411 MDLTAEKKESESNMNHNSEIADSPSQLAPDANNYCNEEAEERQARDLKAGLHPLKHKFVFWYTRRSPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSTLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPHDASLRDNSSYRNTWLRG* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2955 231 MobiDBLite consensus disorder prediction 16 31 - -
Lja2g2955 231 MobiDBLite consensus disorder prediction 1 31 - -
Lja2g2955 231 MobiDBLite consensus disorder prediction 1 15 - -
Lja2g2955 231 Gene3D RNA Cap, Translation Initiation Factor Eif4e 25 224 IPR023398 -
Lja2g2955 231 SUPERFAMILY eIF4e-like 36 227 IPR023398 -
Lja2g2955 231 ProSitePatterns Eukaryotic initiation factor 4E signature. 109 132 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Lja2g2955 231 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 37 231 IPR001040 GO:0003723|GO:0003743|GO:0006413
Lja2g2955 231 Pfam Eukaryotic initiation factor 4E 53 211 IPR001040 GO:0003723|GO:0003743|GO:0006413
Lja2g2955 231 PANTHER BNAA10G16710D PROTEIN 37 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2955 Lja-Chr2 51564904 51578616 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2955 17 231 Eukaryotic Initiation Factors Gene Family AT5G18110 77.674 3.61e-126 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2955 K03259 - gmx:100499744 426.787