Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2940 ATGGAACCTGAATCCAGAGCTTCTTCTTCTCGAAATCCATCTCAGTTGTCGGGGGTAAACTTATCTAGGAATTTACTGTTAGCATATCAAAGCTTTGGTGTAATATATGGAGATCTAAGCACATCACCTCTCTATGTTTATAAAAACACATTTAAAGGAAAGTTGCAGGACCACCGTGATGAAGAAAGTATTTTTGGCGCTTTTTCGTTGATTTTCTGGACGCTCACATTAATACCTCTGCTTAAATATGTATTCATCGTATTGAGTGCTGATGATAATGGTGAAGGTGGGACATTTTCTCTATATTCACTGCTCTGTAGGCATGCCAAGTTTAATTTGCTCCCCAATCAGCAGGCAGCTGATGAGGAGCTGTCAGCGTATAAATATGGTCCCTCATCATCACAGTCAGGAGCCTCTTCTCCACTAAAGAGGCTTTTTGAGAAGCATAAAAGGTCAAGATCAGCACTGCTTGTTGTAGTACTGCTTGGTACTTGCATGGTCATAGGTGATGGTGTACTTTCTCCAGCAATATCAGTTCTAGCATCAGTCTCAGGAATACAAGTAATAGAAACAAAATTCACTAATGGTGAGCTTGTCCTTCTGGCTTGTGTCATAATTGTTGGACTGTTTGCTCTCCAACATTGTGGCACGCACAGAGTTGCATTCTTGTTTGCACCAATTGTAATCATCTGGCTTGTATCCATTTTATGTGTTGGGATTTATAATACAATACATTGGAATCCAAAAATAGTCCGTGCTTTATCCCCGCACTACATCATCAAGTTCTTTATCAACACTGGCAAAGAGGGCTGGATTTCTCTTGGAGGGATACTTCTCTGTATTACTGGAACTGAAGCTATGTTTGCAGATCTTGGCCATTTCACAGCTTTTTCAATAAAGCTTGCATTTGTCATTATTATATACCCTTGTTTGGTAGTACAGTACATGGGCCAAGCGGCTTTTTTGTCTAAAAACCTCAAGTCTATTGACAACAGTTTTTATGACTCAATTCCTGGTCCAGTGTTTTGGCCTGTCTTTCTTATTGCGACCCTTGCAGCTATTGTTGGGAGTCAAGCTACTATTACTGCCACTTTCTCCATCATCAAGCAATGCCATGCACTTGGTTGCTTTCCTAGAGTCAAAGTTGTACACACCTCAAAACATATATTTGGACAGATCTACATCCCAGAAATAAACTGGATACTTATGATCCTGTCTCTTGCTGTAACCATTGGATTTCAGGACACAACCTTCATTGGAAATGCTTATGGGGTTGCTTGTATTACGGTTATGTTTGTGACTACGTTTCTGATGGCGCTAATCATAATCTTTGTCTGGCAGAAAAGCATACTGATTGCTACAATATTTCTTTTATTCTTTTGGGTGATAGAGGGTGTATATGTATCAGCAGCACTAATAAAAGTGCATCAGGGAGGATGGGTTCCTCTTGTCTTATCCTTCATCTTTCTGGTCATTATGTATGTATGGCATTATGGTACTCGTAAGAAGTACAGCTATGATCTACGCAACAAAGTTTCATTGAAATGGTTACTGGCTTTGGGCCCTAGCCTTGGTATTGTGCGTGTCCCAGGGATAGGTCTCATCTACACTGAGCTTGCTACGGGGATACCTTCAATATTTTCCCACTTCGTAACCAACCTCCCCGCATTTCACCAGGTGTTGGTTTTTGTTTGTGTGAAATCAGTTCCTGTTCCACATGTCTCATCTGAAGAACGCTTCCTGATTGGGCGAGCTTGTCCCAGACCATATCGTATGTATAGGTGCATTGTGCGATATGGGTACAAGGACATTAAAAAGGATGATGGAGATTTTGAGAACCATCTCATACAAAGTATAGCAGAGTTCATCGTGATGGAGGCAGCGGAATCACAGTTCTCAAGTTCTGAAGCTTCTTCACTTGATGGCAGGATGGCTGTTATAAGTACTAGAAGCTTAGAATCAACTTCAAGCCTGATAGTATCTGAGCTTGAAGATTTTGGTGTGGATGACAGCATCGCTAGCAGCAGATCTTCAACGCTTCGACGTTTGCAATCAACTTATGATGATGAAAACCCACAGCTAAGAAAGCGGCGAGTGAGGTTTCAAGTACCTAACAGTCCTGGGTTGGACCATGCTGTTAAGGAAGAGCTCTTAGATTTAGTTCAAGCTAAGGAGGCTGGTGTTGCATATATATTGGGGAACTCATATGTGAAGGCAAGGAAATCATCCTCATTCTTGAAGCGGCTTGCCATTGACATTGGATACTCATTTCTAAGGAAGAATTGCAGGAGCCCAGCTGTGGCTCTTAACATTCCTCACATCAGTCTTATTGAAGTTGGAATGATATATTATGTTTAG 2358 0.4122 MEPESRASSSRNPSQLSGVNLSRNLLLAYQSFGVIYGDLSTSPLYVYKNTFKGKLQDHRDEESIFGAFSLIFWTLTLIPLLKYVFIVLSADDNGEGGTFSLYSLLCRHAKFNLLPNQQAADEELSAYKYGPSSSQSGASSPLKRLFEKHKRSRSALLVVVLLGTCMVIGDGVLSPAISVLASVSGIQVIETKFTNGELVLLACVIIVGLFALQHCGTHRVAFLFAPIVIIWLVSILCVGIYNTIHWNPKIVRALSPHYIIKFFINTGKEGWISLGGILLCITGTEAMFADLGHFTAFSIKLAFVIIIYPCLVVQYMGQAAFLSKNLKSIDNSFYDSIPGPVFWPVFLIATLAAIVGSQATITATFSIIKQCHALGCFPRVKVVHTSKHIFGQIYIPEINWILMILSLAVTIGFQDTTFIGNAYGVACITVMFVTTFLMALIIIFVWQKSILIATIFLLFFWVIEGVYVSAALIKVHQGGWVPLVLSFIFLVIMYVWHYGTRKKYSYDLRNKVSLKWLLALGPSLGIVRVPGIGLIYTELATGIPSIFSHFVTNLPAFHQVLVFVCVKSVPVPHVSSEERFLIGRACPRPYRMYRCIVRYGYKDIKKDDGDFENHLIQSIAEFIVMEAAESQFSSSEASSLDGRMAVISTRSLESTSSLIVSELEDFGVDDSIASSRSSTLRRLQSTYDDENPQLRKRRVRFQVPNSPGLDHAVKEELLDLVQAKEAGVAYILGNSYVKARKSSSFLKRLAIDIGYSFLRKNCRSPAVALNIPHISLIEVGMIYYV* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2940 785 Pfam K+ potassium transporter 29 603 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lja2g2940 785 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 20 785 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lja2g2940 785 PANTHER POTASSIUM TRANSPORTER 4 20 785 - -
Lja2g2940 785 TIGRFAM kup: potassium uptake protein 27 785 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2940 Lja-Chr2 50552222 50574421 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2940 1 785 Inorganic Solute Cotransporters AT3G02050 73.797 0.0 1181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2940 K03549 - gmx:100790329 1313.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2940 2 50552222 50574421 Lja2g2940 2 50552222 50574421 ECH