Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2928 ATGGGTGATCTCTCAGTAACCTCAGGCCGCAATTCTCTGGTCCCGAGTTTCCTGTACAAGAAGGATGTGGTTGAATCTTCGCCGTCGACGTCGTTATCGAGGTTCATGGTTGCTTCACCGAGCGAGCGTGGCAATTCTAACATCACGATGTACTCGCCGGCGTTCTACGGTGCTTGCGCCGTGGGTGGATTTCTCTGCTGTGGTCTGACTCACATGGCGGTTACACCTCTTGACCTTGTCAAATGTAATATGCAGGTTGATCCTGCTAAGTACAAGAGCACTACCTCTGCATTTCAAATCATGTTCAAGGAGCAGGGATTCAGGAGCTTTTTCCGAGGATGGGTGCCTACATATTTGGGTTACAGTGCACAGGGTGCCTTCAAATATGGGCTCTATGAGTACTTTAAGAAGTACTATTCTGACATTGCTGGTCCAGAGTATGCATCTAAGTATAAGACATTGATCTACCTCGCTGGTTCAGCTTCATCCGAGGTTATTGCAGATGTTGCACTTTGTCCATTCGAGGCGGTCAAGGTTCGGGTTCAAACTCAGCCCGGTTTTGCTCGAGGCCTTGCAGACGGGCTACCAAAATTAGTCAAATCTGAAGGAGTTGCAGGGTTATATAAAGGAATCGTGCCTCTGTGGGGAAGACAGGTTCCATATACAATGATGAAGTTTTCTTCTTTTGAGAACATTGTTGAGATGATGTATAAGCATGTCATCCCCAAACCAAAGAATGATTGCAGCAAAACCCTGCAACTTGGAGTGAGTTTTGCCGGTGGATATCTAGCTGGTATATTATGTGCGGTTGTATCTCATCCTGCTGATAACCTCGTCTCTTTCTTGAACAATTCAAAAGGGGCAACAGTTGGTGATGCGGTAAAGAATCTTGGACTATGGGGTCTGTTTACCCGTGGCCTTCCTCTTCGAATTCTTATGGTTGGAACTCTCACCGGAGCTCAATGGGGAATTTATGATGCATTCAAAGTTTCTGTGGGACTGCCAACGACTGGTGGTGTTGCTCCTGCTGTTGTTCTTACTCCCACTACTTAG 1053 0.4672 MGDLSVTSGRNSLVPSFLYKKDVVESSPSTSLSRFMVASPSERGNSNITMYSPAFYGACAVGGFLCCGLTHMAVTPLDLVKCNMQVDPAKYKSTTSAFQIMFKEQGFRSFFRGWVPTYLGYSAQGAFKYGLYEYFKKYYSDIAGPEYASKYKTLIYLAGSASSEVIADVALCPFEAVKVRVQTQPGFARGLADGLPKLVKSEGVAGLYKGIVPLWGRQVPYTMMKFSSFENIVEMMYKHVIPKPKNDCSKTLQLGVSFAGGYLAGILCAVVSHPADNLVSFLNNSKGATVGDAVKNLGLWGLFTRGLPLRILMVGTLTGAQWGIYDAFKVSVGLPTTGGVAPAVVLTPTT* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2928 350 Pfam Mitochondrial carrier protein 58 140 IPR018108 -
Lja2g2928 350 Pfam Mitochondrial carrier protein 153 239 IPR018108 -
Lja2g2928 350 PANTHER PHOSPHATE CARRIER PROTEIN 26 343 - -
Lja2g2928 350 SUPERFAMILY Mitochondrial carrier 58 327 IPR023395 -
Lja2g2928 350 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 26 343 IPR044677 GO:0005315|GO:1990547
Lja2g2928 350 ProSiteProfiles Solute carrier (Solcar) repeat profile. 54 138 IPR018108 -
Lja2g2928 350 ProSiteProfiles Solute carrier (Solcar) repeat profile. 151 235 IPR018108 -
Lja2g2928 350 Gene3D Mitochondrial carrier domain 56 330 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2928 Lja-Chr2 49831338 49834466 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2928 6 349 Chloroplast and Mitochondria Gene Families AT5G14040 69.355 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2928 K15102 - twl:119993760 551.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1697 1 18699359 18703042 Lja2g2928 2 49831338 49834466 PCT