Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2923 ATGGAAAACGACAAGAACCTTTCTGAGAATTCTGACAGTTTCGCTCGCAAAGACGAGGACACTATCGCCGGTGATGCCCCGCCGGTCCCGGAACATGCAGATAATGTTGATGCCAAATCGGAAGGCGAAACTGAAAAACCTGCAGATGCAGATCATGTTCAGGGAGAGCCAGAAGAGGAAGCAACCGTTGAGGTTCCACCAGAAACTCCTCCTCCAAGCCTTGAGAAGGTTTCAGAAGACATTGATCTGTTTTTGGCCAACAATGATAACAAAAGTACAGAGATCCCTGATTTCGTTGACAGGTTCATGGATCTGGCTGAAGAGAAGGTCGCCAAGTTTGAATCAGGAGGTGAAGCCAAATTGGGCGAGAATGCGGAAGAAGATTCGGTTCTGTTTGAAGCTGTGAATCGCATTTCAAAGCTTATGAAATCGGTGAACGCAGAGTCTCAACAACCGGAGGAGAAAGAGGTAAAAGGGGAAAATGAAGAAACAGAAGAAGAATCAGAAAAGAAAGAGATTGATGAGAAAAAGTGTAGCAAAAAGGATTTATTGGTTAACCGCATCGGCGCGATTCATCAGCGGGTGATGTCCTATTTGGAGGAGGAGTTCCGGCTGATAATGGAAGAATGCAGAAAAGAAACCAAATCGGAACCCGGCAGTGGCAGCAACGATCCCAAAGGGAAGAATGTGGCTGAACCGTCGGATTCCGAAGCTGTTGAGACGGTTACGGATTTCCCGGGTTTCCCGGAGGAGGCCGTTACGAGTTTGAACAAGATAGCGCGGGAGATGATATCAGGCGGTTATGAAGCCGAATGCTGCCATGTGTACGCAATTTCGAGGAAGCTTGCGTTCGAGGAGAGCCTGAGAAAGTTCGGGTACGAGAAGATCAGTGCCGATGAGGTCCAGAAGATACAGTGGGAGACATTGGAGAGGGAGATCCCAACGTGGATCAACACATTCAAGGAATGCACCGCCGTGTGGTTCCCTGGCGAGAGGAAACTGGCGGAGTCCGTGTTTGCTGAGAACCCCGATGCGGCGGGGAGCCTCTACGGGAGCCTCTCCCGTAGCGTGGCGGTGCAGCTTCTCAACTTTGCAGAGAGCGTGGCGATGACGAAGCGCGCAGGTGAGAAGCTCTTCAAGCTTCTTGACATGTATGAGGCCCTCCGGGACGCGATTCCCAAACTGGAGAATCTCTTCCCGGAGGACATCATGGACGAGGTGAAGGCGGAGATGACGTTGGCGAAGTGCAGGCTCGGCGAGGCGGCGGTGTTGATATTTTGCGAGCTGGAGAATTCTATCAAGTCTGAAACTGGGAGAACCCCGGTTGCCGGCGGTGCTGTCCACCCTCTGACACGGTACATCATGAACTACCTCCGCTTGGCTTGTGAATACAAGGACACGCTGGAGGAGGTATTCAAGGAGCATTCGAAAATCGAGCGTGCCGACTCTACAAGCAGGCCTCACTACGACGAGGGTGATCACCAAAATGAGAACAATCAGAGGCATGGAGAGAAAGAAAAGGCGTCGCCGTTCGCGACGCAACTGATGAGGGTGATGGAGCTGCTAGATTCAAATCTTGAAGGGAAGGCCAAGCTGTACAAGGAGGTTGCACTAAGCTGCATCTTCATGATGAACAACGGGAGATACATTGTCCAGAAAATCAAAGGCTCCGCTGAGATCTACCAGGTGATGGGAGAGACATGGACTCGGAAGAGATCCTCAGAGCTGAGAACCTACCACAAGAACTACCAGATTGAGACATGGAGCAAGATTCTCGGGTGCTTGAGCCCCAAAGGATTGAATGATAACGGGAAGGTGCAGAAGCCAATGCTGAAGGAGAGGTTCAAGACTTTCAATACTTTGTTTGAGGATATTCACAAGACGCAAAGCACGTGGGTGGTGAGTGACGAGCAGCTTCAGTCGGAGCTGAGGGTTTCGATTTCATCGCTGGTGATTCCGGCGTACCGGTCTTTTCTGGGGCGATTCTCGCAGTATTTGGACCCGGGGAGGCAAACAGAGAAGTACATTAAGTACCAGGCTGAAGATATAGAGAATTACATTGATGAGTTGTTTGATGGGAACCCTCACCATCAGGGCAATTCAAGAAAGAAAGCATAG 2118 0.5052 MENDKNLSENSDSFARKDEDTIAGDAPPVPEHADNVDAKSEGETEKPADADHVQGEPEEEATVEVPPETPPPSLEKVSEDIDLFLANNDNKSTEIPDFVDRFMDLAEEKVAKFESGGEAKLGENAEEDSVLFEAVNRISKLMKSVNAESQQPEEKEVKGENEETEEESEKKEIDEKKCSKKDLLVNRIGAIHQRVMSYLEEEFRLIMEECRKETKSEPGSGSNDPKGKNVAEPSDSEAVETVTDFPGFPEEAVTSLNKIAREMISGGYEAECCHVYAISRKLAFEESLRKFGYEKISADEVQKIQWETLEREIPTWINTFKECTAVWFPGERKLAESVFAENPDAAGSLYGSLSRSVAVQLLNFAESVAMTKRAGEKLFKLLDMYEALRDAIPKLENLFPEDIMDEVKAEMTLAKCRLGEAAVLIFCELENSIKSETGRTPVAGGAVHPLTRYIMNYLRLACEYKDTLEEVFKEHSKIERADSTSRPHYDEGDHQNENNQRHGEKEKASPFATQLMRVMELLDSNLEGKAKLYKEVALSCIFMMNNGRYIVQKIKGSAEIYQVMGETWTRKRSSELRTYHKNYQIETWSKILGCLSPKGLNDNGKVQKPMLKERFKTFNTLFEDIHKTQSTWVVSDEQLQSELRVSISSLVIPAYRSFLGRFSQYLDPGRQTEKYIKYQAEDIENYIDELFDGNPHHQGNSRKKA* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2923 705 Gene3D Exocyst complex component Exo70 150 700 - -
Lja2g2923 705 MobiDBLite consensus disorder prediction 1 25 - -
Lja2g2923 705 PANTHER EXOCYST COMPLEX PROTEIN EXO70 47 696 IPR004140 GO:0000145|GO:0006887
Lja2g2923 705 Coils Coil 154 174 - -
Lja2g2923 705 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 47 696 - -
Lja2g2923 705 MobiDBLite consensus disorder prediction 32 59 - -
Lja2g2923 705 SUPERFAMILY Cullin repeat-like 133 692 IPR016159 -
Lja2g2923 705 MobiDBLite consensus disorder prediction 213 241 - -
Lja2g2923 705 Pfam Exo70 exocyst complex subunit 316 689 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lja2g2923 705 MobiDBLite consensus disorder prediction 477 508 - -
Lja2g2923 705 MobiDBLite consensus disorder prediction 143 175 - -
Lja2g2923 705 MobiDBLite consensus disorder prediction 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2923 Lja-Chr2 49743326 49745443 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2923 3 694 EXO70 exocyst subunit family AT5G13990 46.930 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2923 K07195 - gmx:100819960 867.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2923 2 49743326 49745443 Lja2g2923 2 49743326 49745443 ECH
Lja1g1729 1 19288179 19290274 Lja2g2923 2 49743326 49745443 PCT