Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2912 ATGCCGCCGGAACCGGTGCCATGGGATCGAAAGGACTATTTCAAGGACAGGAAGCGCGACAGGTCTGAGTCACTTGGGCCTGTGGCGAGATGGAGAGACTCGTCCACTCATCACAGCTCACGCGAGTTCAGACGATGGGGATCGCCTGAGTTCCGGCGACCTGCAGGACATGGCAAGCATGGTGGTTGGCATCTGTTTCCAGAAGAATCTGGTCATGGGTATGCGTCTTCTCGATCCTATGACAAGATGGTGGAGGAAGATAACTGGAGGCCAACTGTTTCTCGAGGAGATGGAAAGTATGGCAGGAGCTATAGGGAAAGTAGAGGATCCTTTAACCGGAGAGATTGGAGAGAACATTCATGGCAACCCAATATTGGTGCTTTCGGTTTTTCCCGAAGGCAGCATGGTGCGAACAATGACAGGAGGTCAGTTGATGATATGGTACCCACCTACTCCTCTCATCCACATTCCAACTATGCAAACACTTGGCAGCAGCGCAACTTCAGAGACCAGCATAGTAAGATTGGTGGTGTTAATGGGTTCGGCAGGGGCCGGAGATTTGATAGGGAGAGTTCTCTGGGTTTGGTTGACTGGAAGCCCCATAAATGGAGCCGTTCTGGAGGCTTGTCCTCAAGAGACTCTGGCCTTAGACGTTCAAGTAGATCAAGGAGCATTGGAGCGGCAGATTCCTGTGAAAGGAAGGCTGGTTTGCAACAAAGAAATGGCACTGCTGTCAAGTCAAGTTCTGGGGAAGCTGCTGCATGTGAGACATCTGCTACATATGAAGATACACATTCAAAGAAAAAGCCTAGGCTAAATTGGGGTGAGGGACTTGCAAAGTTTGAGAAGAAGAAAGTAGAGGGGCCTGATGTCAGTTCTAACGAAGATGGCCCTGTTACGTCTCTTATTAATATGGAACCTGGTAATATTCTCCATCCCAGCGTAGTAGATAAAAGCGCCAAAGTTTCAATATCCTCAGATTGTGCATCTCCTGCAATTCAATCTACTGTTGCCGGCAGCTCCCCTCCAGGTGTGGATAGTAAAATGTTTGGAAAAGCCGAAGCTGTGGATAATGATGTCAGTAACTTAAGAAGCTCACCAGGTCCTGGGTCTCAAAATCCTCCGCAGGTGTTGTCTTTAAATTTAGAGAAGGTGGATGTTGACTCATTGAGTGGTTTGGGCTCTTCACTTTTTGAATTGGTACAGTCTGATGATCTGAGCTCTGCGGATGCTGATGTCTTAAGATCCACCACAATGAATAAGTTGCTGTTATTGAAAGCTGACATTTCAAAGGTATTGGAGGTGACTGAAACTGAAATTGATTTACTTGAAAATGAACTGAAGTCGCTAAATTCTGAGCCTGGGGATAAATTTCCACCTTCAGCAGCTGTTGACTCCCTCCTGCTGTGTCACAATTCAAAATTTTGTGATGAACATGCTGGAGGCTCCAGTAACGTTGCATGTCCAGAAACATTGAAAATGGTTTCATCTATTGACCCTAATATGGAGAAGATGGCTCATTCTACTAACTTGCCTGGTATACATAATAATAGCAATGATGCTGATATCAATAGGCCTGGAACGGCAATGTCTAAGTTTGTGGAGCCCCTGCCCTCGATTAGTGAAGTTTCATCATGCAATGTGAGTCGATTTGGCACTTGCTTGAAAGACTTGGATGTAATTCGGTCAACAGCAGAGAAATGCTTAGTTCCCTGTACTTACAGGCAAGCTGCCAGCGCATCTGCTTGTGGTGATGGAAATTCATCTATGGAGGTTAAGGTTAAAGATTTCATGGATGCTAACTCTGGTGCAAGCTTTTATCCCAGCTCTGATGATACTTTATATAGTACAATTATGTCTTGCAATATAGAAACTGCAAAAACAGCATCTGAAGTATTTGCTAAGTTATTGCCAGATGATTGTGGTAAGATCAGTAATATTGGAGCTAGCAGTGACTCTTGCTCTCGAGATGGTGCACTCATTATGGAAAAAATTGCAGAGAAAAAGCGGTTTGCAAGATTTAAGGAGAGAGTTATAGCACTTAAGTTTAAAGCCTTGCGTCACCTGTGGAAAAAAGATATGCGCGTACTGTCTATTAGGAAATGCCGTCCAAAATCTCACAAGAAGCCTCAATTAGGTCTACGAACTATCAGGAATGCTCATCAGAAGAAACGTTCATCTAATCGTTTTCATTTTCCCATCCCTGGAAATCCACTTAACTTGGTTCCAACATCTGAGCTGATTAATTGTACAAGCCAACTGCTTTCAGAATCCCAAGATGTAATTCACAGGAACACCTTGAAGATGCCAGCATTAATTTTGGATCAGAAGGAGAAAACGATTTCAAAGTTCTTATCTAGTAATGGGCTGGTTGAAGATCCATTGGCTATTGAGAAAGAAAGGTCTATCGTCAACCCTTGGACATCAGAAGAGAGAGAGATTTTCCTGGAAAAATTCGCAGCCTTTGGAAAAGATTTTCGGAAAATTGCATCTTTCCTTGATTACAAGACCACTGCTGACTGTGTTGAATTCTACTACAAAAACCACAAGTCCGATTATTTTGAGAAAATTAAGAAAAAAGATGGTGGCAAACTCAAGAAGTTGTTTAGGGTAAAGACTGACTTGCTAGCATCAAGTAAAAGGTGTAATCGCGAAGTGAATGCTGCTTCACTTGAGATGTTGAATGCAGCTTCGGTGATGGCAGATGGCATTGCACGTAATCGAAAATTGCGTTCAGGAAGATCCCTTTGGAGGGGACATGGTGATACGAAAACATCAAGGGGTAAGGAGAGCATCAAAGAGAGACCAAGCAGTTTTGACATTCTTCAAGATGAAAGAGAGACAGTTGCAGCTGATGTATTGGCTGGTATATGTGGTTCTCTTTCATCTGAGGCTATGAGTTCCGGCATGACAGGTTCAGTTCATGCTGTGGATGTTAACAATGACAGGAATGGCGTGAATGTGACGTCTCTAAGCGAACAACAACCTTTGATGCCTGATGTTACTCAGAATATTGATGATGGTACTTTTTCCGGACAGAGCGGTGGTGAACTGGATTCTGCTGATTGGACAGATGGGGAGAAAGCAGGCTTGCTTCAGGCTGTATCATCTTTTGGAAAGGATTTCGCAATGATTGCACAGTGTGTTGGAACGAAGTCCCTAGACCAGTGCAAAGTTTTTTTCTGCAAAGCTCAGAAAACCCTTAGAATGAATCCCCCCATATCTGAAAACATTGGATCGCTAGTGAATGATGATGCAAATAGTGGCAGAAGTGACTCAGATGATGCATGCAATGAAGAGAGAGGTTCTGTCATTGGCACTGATACGTCAGGTATTAAAGCAGGTGAGGAACTGGCTTCATCTGTCATGAACTCATACCATGAATCCAATCCTGTGGAAGCCAGGAATGTAACGAAGGGCAAGTCCATACTGGACACTGATGGCGACGAGGATGTCTTGTACAGTTCTGATAAGTCTGGTTCAGTCAGGGATGAGAGAGCTATGATTGTGTCGGATAGCATAGAAATTGAAAAAGATAAACTGAATGAAATGGGAGGTGCAGTTACTGAATTGGTGCCTGCTTCCAAGATTGAACCATGCCACTCTAATTCTGTTGCTGAGGACAGACTGGTTTCTGAGGTTTCTTCTGCGTGCCATGGAAATGAATTGGAGGGTTCACTTTCTTGTCTTTATAGGGATAATTTACTTGAAGCTGATACAGATGTTGGAGATGAATTAAAAAACAAAATCTATGATTCAAGCACTACGCTAAATGCTTCAGTGTCTCCTATAGAAATTTCTTGTCCAAGATTAATTTCAGATGCTGAAAATCAGCCCCAACATTGCCTTGATGAAAAACCTCCTTTCTCAGGATCATCGGAGGATCCTTCTACAACTGTGAATTCGGTGTTGCAAGATACTGCTGGTGCTTCTTTGCCATGTGAGAAAACAGCTAGCCAAAAGCTATTGTCTTCTACTTGTGATTTTCAGAGAAGTAGATATATCAGCGGTCATAATTCCAGTAGCAATGGTAGCTATAATGTTCATAACCCTGGGAATCTATTAGACTGTGCTGAGGCTGCTAAAGTTCTTCATCGCTATCCATTGGGAGTGCCTATTAAGGATGTAAATGTGGGTATGAGCCGCAGCAGCTCAGTGACTGAGTTGCCTGTTTTGTCAACAAAGATTGAACAAGCTGATGATCATCACAAAACACAGATGCAGTGTTTGTCCGATTCAGAAAAAACGTCCCGAAGTGGTGATGTGAAACTATTCGGGAAGATATTAACCCGCCCTTCATCCACCCAGAAGCCTAATTTATCAGGCAAGGTAAAGAGAGAAAATGGTGCCCATTATCCGAATTTAAGCAGCGCATCTTCTAATTCTGATGTAAAATCAGCTATTGTGAAGATTGATCACAATGATTGCCAGATCCTTGAAAATATTTCGTTCACGAGTTATTGGGATGGGAACAGAATAACGTCTGGTTTCTCAATACAGTCATTGCCAGTTTTGGCCAAGAATCAACAGAACGTGAATGGACCATCTGTCAATGGTAGCAATGGTGTGATTGATTATCAGATGTTCAGAAACAGGGATGGTCTGAAATTGCAGCCCTCTATGGTAGATGTAAAGCATTGCCAAGATGTCTCCTCCGAGATGCAGAGAAGAAATGGTTTTGAAACAATCCCTAGTTTACTGAAGCAGGGTGAGGGAATGGTGGCAATGAATGGTGTAAGGAGACCGGGAATTCCTGTGGGAGGATTAGGCAGTGGAGTCTCAGATCCTGTGGCAGCCATCAAAATGCATTATTCCAATGCTGCTCAAACTGGCGTTCAGACTGGGAATAACACCAGTAAGGATAAATCTTGA 4872 0.4335 MPPEPVPWDRKDYFKDRKRDRSESLGPVARWRDSSTHHSSREFRRWGSPEFRRPAGHGKHGGWHLFPEESGHGYASSRSYDKMVEEDNWRPTVSRGDGKYGRSYRESRGSFNRRDWREHSWQPNIGAFGFSRRQHGANNDRRSVDDMVPTYSSHPHSNYANTWQQRNFRDQHSKIGGVNGFGRGRRFDRESSLGLVDWKPHKWSRSGGLSSRDSGLRRSSRSRSIGAADSCERKAGLQQRNGTAVKSSSGEAAACETSATYEDTHSKKKPRLNWGEGLAKFEKKKVEGPDVSSNEDGPVTSLINMEPGNILHPSVVDKSAKVSISSDCASPAIQSTVAGSSPPGVDSKMFGKAEAVDNDVSNLRSSPGPGSQNPPQVLSLNLEKVDVDSLSGLGSSLFELVQSDDLSSADADVLRSTTMNKLLLLKADISKVLEVTETEIDLLENELKSLNSEPGDKFPPSAAVDSLLLCHNSKFCDEHAGGSSNVACPETLKMVSSIDPNMEKMAHSTNLPGIHNNSNDADINRPGTAMSKFVEPLPSISEVSSCNVSRFGTCLKDLDVIRSTAEKCLVPCTYRQAASASACGDGNSSMEVKVKDFMDANSGASFYPSSDDTLYSTIMSCNIETAKTASEVFAKLLPDDCGKISNIGASSDSCSRDGALIMEKIAEKKRFARFKERVIALKFKALRHLWKKDMRVLSIRKCRPKSHKKPQLGLRTIRNAHQKKRSSNRFHFPIPGNPLNLVPTSELINCTSQLLSESQDVIHRNTLKMPALILDQKEKTISKFLSSNGLVEDPLAIEKERSIVNPWTSEEREIFLEKFAAFGKDFRKIASFLDYKTTADCVEFYYKNHKSDYFEKIKKKDGGKLKKLFRVKTDLLASSKRCNREVNAASLEMLNAASVMADGIARNRKLRSGRSLWRGHGDTKTSRGKESIKERPSSFDILQDERETVAADVLAGICGSLSSEAMSSGMTGSVHAVDVNNDRNGVNVTSLSEQQPLMPDVTQNIDDGTFSGQSGGELDSADWTDGEKAGLLQAVSSFGKDFAMIAQCVGTKSLDQCKVFFCKAQKTLRMNPPISENIGSLVNDDANSGRSDSDDACNEERGSVIGTDTSGIKAGEELASSVMNSYHESNPVEARNVTKGKSILDTDGDEDVLYSSDKSGSVRDERAMIVSDSIEIEKDKLNEMGGAVTELVPASKIEPCHSNSVAEDRLVSEVSSACHGNELEGSLSCLYRDNLLEADTDVGDELKNKIYDSSTTLNASVSPIEISCPRLISDAENQPQHCLDEKPPFSGSSEDPSTTVNSVLQDTAGASLPCEKTASQKLLSSTCDFQRSRYISGHNSSSNGSYNVHNPGNLLDCAEAAKVLHRYPLGVPIKDVNVGMSRSSSVTELPVLSTKIEQADDHHKTQMQCLSDSEKTSRSGDVKLFGKILTRPSSTQKPNLSGKVKRENGAHYPNLSSASSNSDVKSAIVKIDHNDCQILENISFTSYWDGNRITSGFSIQSLPVLAKNQQNVNGPSVNGSNGVIDYQMFRNRDGLKLQPSMVDVKHCQDVSSEMQRRNGFETIPSLLKQGEGMVAMNGVRRPGIPVGGLGSGVSDPVAAIKMHYSNAAQTGVQTGNNTSKDKS* 1624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2912 1623 ProSiteProfiles SANT domain profile. 802 853 IPR017884 -
Lja2g2912 1623 MobiDBLite consensus disorder prediction 34 66 - -
Lja2g2912 1623 Gene3D - 783 855 - -
Lja2g2912 1623 Coils Coil 426 453 - -
Lja2g2912 1623 MobiDBLite consensus disorder prediction 1280 1300 - -
Lja2g2912 1623 MobiDBLite consensus disorder prediction 1432 1460 - -
Lja2g2912 1623 ProSiteProfiles SANT domain profile. 1018 1069 IPR017884 -
Lja2g2912 1623 MobiDBLite consensus disorder prediction 18 80 - -
Lja2g2912 1623 MobiDBLite consensus disorder prediction 1079 1108 - -
Lja2g2912 1623 MobiDBLite consensus disorder prediction 207 226 - -
Lja2g2912 1623 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1605 - -
Lja2g2912 1623 SUPERFAMILY Homeodomain-like 790 850 IPR009057 -
Lja2g2912 1623 CDD SANT 1023 1063 IPR001005 -
Lja2g2912 1623 Pfam Myb-like DNA-binding domain 806 847 IPR001005 -
Lja2g2912 1623 MobiDBLite consensus disorder prediction 915 936 - -
Lja2g2912 1623 SMART sant 1019 1067 IPR001005 -
Lja2g2912 1623 SMART sant 803 851 IPR001005 -
Lja2g2912 1623 SUPERFAMILY Homeodomain-like 1020 1069 IPR009057 -
Lja2g2912 1623 MobiDBLite consensus disorder prediction 236 255 - -
Lja2g2912 1623 Gene3D - 970 1077 - -
Lja2g2912 1623 MobiDBLite consensus disorder prediction 202 271 - -
Lja2g2912 1623 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2912 Lja-Chr2 48945769 48955786 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lja2g2912 Myb_DNA-binding 5.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2912 - - gmx:100810588 1659.43