Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2895 ATGGCTCCGGAGCTTGTAAGGGAACAGCCGTACACCCACGCTGTAGATTTATGGTCTCTTGGTGTTATATTGTATGAGTTATTTTTTGGCCAACCACCATTTTACACAAATTCTGTATATGCTCTCATCAGACAAATTAAAGAGGGTAAGGTTGAATATCCAGGTTCCATGAGTCTAAAATTCAAGAGATTCTTAGAGGGCTTGCTTAACAAGGAACCAGAAAGTCGATTAACTTGGCCCGCTCTTCTTGAACACCCATTTGTTATAGAAACGTCTGATGATCCTGAGGCCAGGGTATTGCATGAGATAAGTGGTTCAGCTAGGGATAGTGATACAACACAGAGGGTCGAAGGAAAAACCATTCAAACTTCAAAAGGTTTGGAGGAGCATATTGCGGCACCGCTTCTGGCTGAAGCTCAGTTAAACGGTCCTAACATTAAGAAAACCAATTCTTCGGTGCTTGATGAGTCAGGCTGCCAAAGTTTGGACATACTTGAAAACAACTCTCGCACGCTAAAAGGTGCACAAATGATTTGTCAAGATAATGAAGCATTGGAACATATTCTGCTACCACTGAAAAGGTGGTCAAAGGGATCACAAAATATTTGCAGTGTTCAAGATATTGCTGATTCTAACCAGTCATTGAGGATTCTCGTAAACCTAGTTGCTGCTGGGGATTTCAATTCTAGTGGATGTGTAGATGAACTAATAAGTGAACTCTTCTTCTTTACTAAATCTGTTATAAGTATAACCATGAAATCCATTGAAGTTGTTGACCTGAGCACCAAGGTAGGTGGTATTATCCTTCAATGTCTAGATCATATGGAATTGAATAATTTGGGCAGGCCTGTGGGCTTTCTTGCTAAAATGGTATTGCACCCCCCTTTAGCAAACCAACTTGTGAATAAAGGTCTTCTGGATTCGAATAGGATGAGAAGGTTGTTTGATCATTTGGGCCCAAAAGAGGTCACACTCAATGCTCTCATGATAATTTCTAATCTTGCTCGCATGGACCAGATATTCTATGAGTACATTGAAGGTGCTTCTATTTTGGAGTCTTTTAAAGTCTTACTTTCGCATGAGGATCCCAATATACGTGCTAAATCTTGCAGTGCTCTTGGAAACATGTGTCGTCATAACGACTACTTTTATAGTTCACTTGCAAGACACCAAATTATTAGTATCCTTGTCGATCGGTGTTATGATCCGGACAAACAAACACGGAAATTTGCCTGTTTCGCTATCGGAAATGCGGCCCACTACAATGACATGTTGTATGAAGAGTTGAGGAGATCGATTCCTCAGTTAGCAAATATATTGCAAATGGCAGAGGATGACATGACTAAGGCAAATGCAGCAGGTGCACTTAGCAATCTGGTTCGCAACTCTGACAAACTTTGTGAAGACATGGTGTCAAAAGGAGCGATTCAGTCTCTTCTGAAGTTAATTTCTGATTGCAGAAGTGATTCAGCAAGTGAATCCCCTTCAGAGATAGCGCTCTATGCCCTAGCAAAGATGTGTGCATATCCACTCTGCAGACAGTTCATACGTTCATCACCTATGTTGCCTGTGATTAGAAGGCTTCAGCGGTCTCCAAAATCATCCATTGCTAAAAATGCCTCTCTGATTATCAACAAAGTCTCCAGATGA 1650 0.4109 MAPELVREQPYTHAVDLWSLGVILYELFFGQPPFYTNSVYALIRQIKEGKVEYPGSMSLKFKRFLEGLLNKEPESRLTWPALLEHPFVIETSDDPEARVLHEISGSARDSDTTQRVEGKTIQTSKGLEEHIAAPLLAEAQLNGPNIKKTNSSVLDESGCQSLDILENNSRTLKGAQMICQDNEALEHILLPLKRWSKGSQNICSVQDIADSNQSLRILVNLVAAGDFNSSGCVDELISELFFFTKSVISITMKSIEVVDLSTKVGGIILQCLDHMELNNLGRPVGFLAKMVLHPPLANQLVNKGLLDSNRMRRLFDHLGPKEVTLNALMIISNLARMDQIFYEYIEGASILESFKVLLSHEDPNIRAKSCSALGNMCRHNDYFYSSLARHQIISILVDRCYDPDKQTRKFACFAIGNAAHYNDMLYEELRRSIPQLANILQMAEDDMTKANAAGALSNLVRNSDKLCEDMVSKGAIQSLLKLISDCRSDSASESPSEIALYALAKMCAYPLCRQFIRSSPMLPVIRRLQRSPKSSIAKNASLIINKVSR* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2895 549 Pfam Protein kinase domain 1 88 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g2895 549 SUPERFAMILY Protein kinase-like (PK-like) 1 99 IPR011009 -
Lja2g2895 549 Coils Coil 426 446 - -
Lja2g2895 549 Gene3D - 287 547 IPR011989 -
Lja2g2895 549 ProSiteProfiles Protein kinase domain profile. 1 88 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g2895 549 SUPERFAMILY ARM repeat 311 535 IPR016024 -
Lja2g2895 549 PANTHER PROTEIN KINASE RELATED 1 251 IPR045193 GO:0004674
Lja2g2895 549 PANTHER PROTEIN KINASE RELATED 262 548 IPR045193 GO:0004674
Lja2g2895 549 Gene3D Transferase(Phosphotransferase) domain 1 1 155 - -
Lja2g2895 549 SMART arm_5 298 336 IPR000225 GO:0005515
Lja2g2895 549 SMART arm_5 380 420 IPR000225 GO:0005515
Lja2g2895 549 SMART arm_5 422 461 IPR000225 GO:0005515
Lja2g2895 549 SMART arm_5 338 378 IPR000225 GO:0005515
Lja2g2895 549 SMART arm_5 462 508 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2895 Lja-Chr2 48203234 48212818 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2895 1 96 EF-hand Containing Proteins AT5G12180 34.000 2.07e-12 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_Fused Lja2g2895 Pkinase 3.6e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2895 K06228 - lja:Lj0g3v0279399.2 1073.54