Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2893 ATGGGTTCAGAAACTTTCCTTGAAGTGGTATTAGCAATACTGTTACCACCTGTTGGTGTTTTCCTTCGCTATGGCTGTGGAGTGGAGTTCTGGATTGATCTCGTACTGACCATACTGGGATACATACCAGGGATTATATATGCCATTTATGTATTGGTTGGATGA 165 0.4182 MGSETFLEVVLAILLPPVGVFLRYGCGVEFWIDLVLTILGYIPGIIYAIYVLVG* 55
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2893 54 ProSitePatterns Uncharacterized protein family UPF0057 signature. 10 25 IPR000612 GO:0016021
Lja2g2893 54 Pfam Proteolipid membrane potential modulator 6 53 IPR000612 GO:0016021
Lja2g2893 54 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 1 53 IPR000612 GO:0016021
Lja2g2893 54 PANTHER BNAA04G22250D PROTEIN 1 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2893 Lja-Chr2 48076068 48076642 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2893 1 54 RCI2 Gene Family AT2G38905 92.593 1.31e-29 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2893 - - gmx:100789888 111.309