Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2865 ATGGCTCCTCCTCCTCCTCCTCCCAATTCCACCACCCAAAATAATAATAGCATTGCTCCCTCATCATTTCAGGTAGAGCCTGCCCAGCATGCAGCAGGGCCCAGCCCACTTGCGAAGATGATTGCTGTGGCGTCCATTGCAGCCGGAGTACAATTCGGCTGGGCCCTACAGCTCTCCCTGCTGACCCCTTATGTCCAGCTACTTGGTGTCCCGCACAAGTGGTCCTCCTTTATCTGGCTCTGTGGGCCCATTTCTGGGCTGGTTGTCCAGCCCATTGTGGGCTATTCCAGTGATCGCTGCACCTCCCGCTTTGGCCGTCGCCGCCCCTTTATCTTTGCTGGCGCGATCGCCGTCGCTATTGCTGTCTTCCTCATCGGCTTCGCCGCAGACATTGGGTACTCCATGGGCGACGACCTCTCAAAGAAAACCCGCCCCCGTGCTGTGGCATTTTTTGTCATTGGCTTCTGGATCCTGGATGTTGCTAACAACATGCTCCAGGGTCCCTGCCGTGCCTTCCTCGGCGACCTTTCCACCGGCCACCACAGCAGGATCCGAACCGCCAACACTATCTTCTCCTTCTTCATGGGCGTTGGTAATGTGCTAGGGTACTTGGCTGGTTCATATGGTGGCCTCCACAAGATCTTTCCCTTCACAGAGACGAAGGCATGCGACGTGTTTTGTGCGAATCTCAAATCATGTTTCTTCTTCTCAATTACCCTCCTACTTGTCCTCTCCGGCTTCGCTCTCTTCTACGTACACGACCCTCCGATCGGGTCGCGTCGTGAAGAGGACGACAAGGCTCCTAAAAACGTCTTCGTCGAGCTCTTCGGGGCGTTTAAGGAGCTAAAGAAGCCGATGTTGATGCTGATGCTGGTGACCTCGCTCAACTGGATCGCGTGGTTCCCGTATGTCCTTTACGACACTGATTGGATGGGTCTTGAGGTGTACGGTGGGAAATTGGGCTCGAAGGCGTACGATGCCGGCGTTCGTGCCGGCGCGTTGGGGCTGGTTCTGAACTCGGTGGTGCTTGGTTTGATGTCGCTGGCGGTGGAGCCGTTGGGGCGTTATCTTGGCGGAGTTAAGAGGCTGTGGGCGATCGTGAACATTATTCTGGCTGTTTGCATGGCGATGACGATGTTGATTACTAAGGTGGCGGAGCACGATCGACGTGTGAGCGGCGGCGCCACCATTGGGAGACCGACCCCCGGGGTGAAGGCCGGTGCCTTGATGTTCTTCGCCGTACTCGGAATCCCTCTTGCGATTACTTATAGTGTACCATTTGCTCTTGCATCAATATACTCTAGCAGTACTGGAGCTGGTCAAGGTTTATCTTTGGGAGTCCTTAATGTTGCGATTGTCATTCCACAGATGATTGTATCAGCATTAAATGGACCGTGGGATTCTTTGTTTGGTGGCGGCAACTTGCCGGCGTTCATGGTGGGTGCGGTGATGGCTGCTGTCAGCGCCGTATTGGCAATGGTTTTGTTGCCTTCTCCAAAGCCAGAGGAGATGGCAAAGGCTTCAATAAGCGCCTCAGGTTTTCATTAG 1548 0.5465 MAPPPPPPNSTTQNNNSIAPSSFQVEPAQHAAGPSPLAKMIAVASIAAGVQFGWALQLSLLTPYVQLLGVPHKWSSFIWLCGPISGLVVQPIVGYSSDRCTSRFGRRRPFIFAGAIAVAIAVFLIGFAADIGYSMGDDLSKKTRPRAVAFFVIGFWILDVANNMLQGPCRAFLGDLSTGHHSRIRTANTIFSFFMGVGNVLGYLAGSYGGLHKIFPFTETKACDVFCANLKSCFFFSITLLLVLSGFALFYVHDPPIGSRREEDDKAPKNVFVELFGAFKELKKPMLMLMLVTSLNWIAWFPYVLYDTDWMGLEVYGGKLGSKAYDAGVRAGALGLVLNSVVLGLMSLAVEPLGRYLGGVKRLWAIVNIILAVCMAMTMLITKVAEHDRRVSGGATIGRPTPGVKAGALMFFAVLGIPLAITYSVPFALASIYSSSTGAGQGLSLGVLNVAIVIPQMIVSALNGPWDSLFGGGNLPAFMVGAVMAAVSAVLAMVLLPSPKPEEMAKASISASGFH* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2865 515 PANTHER SUGAR TRANSPORTER 28 505 - -
Lja2g2865 515 SUPERFAMILY MFS general substrate transporter 40 503 IPR036259 -
Lja2g2865 515 TIGRFAM GPH_sucrose: sucrose/H+ symporter 36 501 IPR005989 GO:0005887|GO:0008515|GO:0015770
Lja2g2865 515 Pfam MFS/sugar transport protein 44 299 - -
Lja2g2865 515 MobiDBLite consensus disorder prediction 1 20 - -
Lja2g2865 515 Gene3D MFS general substrate transporter like domains 37 497 IPR036259 -
Lja2g2865 515 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 28 505 - -
Lja2g2865 515 CDD MFS_SLC45_SUC 40 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2865 Lja-Chr2 46984411 46987952 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2865 34 515 Sucrose Transporter Gene Family AT1G22710 66.191 0.0 648
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2865 K15378 - gmx:100782007 696.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2865 2 46984411 46987952 Lja2g2865 2 46984411 46987952 ECH