Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2864 ATGGAGTCTCCCACCAAGAGCAACCACCTTGACACCAAGGGTTCCTCCCTTCAAATCGAGGCTCATATACCGCAACAGTCCAGCCCCCTCCGCAAGATGATCGCCGTGGCTTCCATAGCCGCCGGCATTCAGTTCGGTTGGGCCCTGCAGCTCTCCCTGCTCACCCCTTACGTGCAGACGCTCGGCGTCCCGCACATTTGGGCCTCCTTCATCTGGCTCTGTGGCCCTGTCTCGGGGCTCCTCGTCCAGCCCATTGTGGGGTACTACAGCGACCGCACCACCTGCCGCTTCGGCCGCCGTCGCCCCTTCATTCTAGCCGGTGCGGTTGCCGTCGCCATCTCCGTCTTCCTCATCGGCTACGCTGCCGATATCGGCCACTCCATGGGAGACGACTTAGCTAAGAAGACCCGCCCCCGTGCCGTGGCCATCTTTGTCTTTGGCTTCTGGATCCTTGATGTCGCCAACAACATGCTTCAGGGTCCTTGTCGTGCCTTCCTCGGTGATCTTGCGGCCGGCGATCAAAAGAAAACGCGGACAGCCATGGGCTTCTTCTCGTTCTTCATGGCGGTCGGGAACGTGCTCGGATACGCGGCAGGCGCCTACAGCGGTCTCCACAAGATCTTCCCCTTCACAGTGACAGATGCCTGCCCGTCGTTCTGCGCGAACCTCAAGAGCTGTTTCTTCTTCTCCATCCTCCTCCTCCTAATTCTGTCCATCGCCGCACTCATCTATGTGGAGGACACCCCGCTCACCAAGAAACCGGCCGCTGACGTTGACAGCCCGGTTTCCTGTTTCGGGGACCTGTTCGGCGCGTTCAAGGAGCTGAAGAAGCCTATGTGGATATTGATGTTGGTGACCGCCGTCAACTGGGTCGCGTGGTTCCCCTTCTTCTTGTTCGACACTGACTGGATGGGTCGGGAGGTGTACGGAGGCGTTGTTGGCGAGAAGGCGTATGATGACGGTGTCCGTGCCGGTTCGCTGGGGCTCATGATTAACGCGGTGGTGCTGGCTTTCATGTCGCTGGCGGTGGAGCCTTTAGGGAGGATTCTTGGCGGAGTGAAGAACTTGTGGGGGATTGTGAACTTCATCTTGGCTATATGCATGGCCATGACCGTGCTCATTACTAAGACGGCGGAGCATGACCGTTTGATCAGCGGCGGCGCCACCGTCGGTGCTCCTTCTTCCGGTGTCAAGGCTGGTGCCATTGCTTTCTTTGGTGTCATGGGAATCCCTCTCGCGATTAATTTCAGTGTTCCTTTTGCTCTGGCATCTATATACTCCAGCGCTGCAGGGGCCGGTCAAGGTTTATCTTTAGGAGTTCTGAATCTTGCAATTGTCGTCCCCCAGATGTTAGTGTCAACATTGAGTGGACCTTGGGATGCTTTGTTTGGTGGTGGCAACTTGCCGGCGTTCGTGGTGGGTGCAGTGATGGCTGCCGTCAGTGCCATAATGGCAATTGTCTTGCTGCCGACTCCGAAGCCCGCTGATGTGGCCAAGGCTTCGAGTCTTCCCCCAGGCGGCGGTTTCCACTGA 1533 0.5786 MESPTKSNHLDTKGSSLQIEAHIPQQSSPLRKMIAVASIAAGIQFGWALQLSLLTPYVQTLGVPHIWASFIWLCGPVSGLLVQPIVGYYSDRTTCRFGRRRPFILAGAVAVAISVFLIGYAADIGHSMGDDLAKKTRPRAVAIFVFGFWILDVANNMLQGPCRAFLGDLAAGDQKKTRTAMGFFSFFMAVGNVLGYAAGAYSGLHKIFPFTVTDACPSFCANLKSCFFFSILLLLILSIAALIYVEDTPLTKKPAADVDSPVSCFGDLFGAFKELKKPMWILMLVTAVNWVAWFPFFLFDTDWMGREVYGGVVGEKAYDDGVRAGSLGLMINAVVLAFMSLAVEPLGRILGGVKNLWGIVNFILAICMAMTVLITKTAEHDRLISGGATVGAPSSGVKAGAIAFFGVMGIPLAINFSVPFALASIYSSAAGAGQGLSLGVLNLAIVVPQMLVSTLSGPWDALFGGGNLPAFVVGAVMAAVSAIMAIVLLPTPKPADVAKASSLPPGGGFH* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2864 510 SUPERFAMILY MFS general substrate transporter 32 494 IPR036259 -
Lja2g2864 510 Gene3D MFS general substrate transporter like domains 27 489 IPR036259 -
Lja2g2864 510 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 14 496 - -
Lja2g2864 510 Pfam MFS/sugar transport protein 36 292 - -
Lja2g2864 510 TIGRFAM GPH_sucrose: sucrose/H+ symporter 29 493 IPR005989 GO:0005887|GO:0008515|GO:0015770
Lja2g2864 510 PANTHER SUGAR TRANSPORTER 14 496 - -
Lja2g2864 510 CDD MFS_SLC45_SUC 33 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2864 Lja-Chr2 46893449 46898586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2864 15 510 Sucrose Transporter Gene Family AT1G22710 65.675 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2864 K15378 - gmx:100784153 730.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2864 2 46893449 46898586 Lja2g2864 2 46893449 46898586 ECH