Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2848 ATGATGCTCTATGTACCACATCCTGCAGGTGGTGTAAGTAGTAGCAAAAACATCAAAGGCTTTGCTCTTCAAGTTCTTACAGGTAGATGGTTCATGATGTTCGCATCATTTATGATCATGTCAGTATCAGGAGCAAGCTACATGTTCAGCCTCTACTCCATAGAAATCAAGTCTTCTCTTGGATATGACCAATCCACTCTCAATCTGTTAAGCTTCTTCAAGGACTTGGGATCCAACGCAGGCATTCTCTCAGGCCTAATCAACGAGGTAACGCCTCCTTGGGTTGTCTTATCAATTGGTGCGGTTTGTAACTTTTTTGGGTATTTCACGATTTGGCTTTCTGTGACCAAAAAATTTGCAAAGCCCCACTTGTGGAACATGTGCTTGTACATCTTCATTGGAGGAAATTCTCATTGTTCAACCAACACTGGAGTTTGGGTGACCAGCATAAAGAACTTTCCTGGTATAAGGGGTGTTGTCATTGGAATTTTGGATGGTTACCTCTGTTTGAGCGCCATAATCATCACTCAACTCTGCTATGCCTTCTTCCAAAACGATTCCAAATCTGTGATTTTGATCATGGCGTGGCTACCGACTGCTACCGCTTTAATTTTTTTGCCGGTTTTCAGGAACCGCAGGAGGTGTGTTCAACAGAAAAAAGACTCCAATGCTTTCTACATGTTCATCTATTCGACACTAGCTCTGGCAGTGTTCTTCATGATGATAATCATTCTGCAAAAATGTTTCAAATTCACTCGGAGCGAGTACTATGTTACTACCGCGCTGATGCTTCTCTTGCTCATCCTTCCAATTGCTGTTGTCATTGCGGAAGAACACAAGATTTGGAAGAGCAAACAAGAACACATCAATTATGAAAATCCTCCAATGAAGTCTGAACAGGTTCCCCAAAAAGGAGTTTCCTGTTGGCAAAACATTTTCAGGCCGCCGGAAAGGGGTGAAGATCATACAATACTTCAAGCCATTTTCAGCCTTGACATGGTAATTCTATTCCTTGCTACTATATGTGGATTTGGTAGCAACTTAACCGTGGTAAACAATTTTAGTCAGATTGCTAAGTCTTTAGGCTACCCTGCACATACCATAACCACATTCATCTCCCTCATGGCAATTTGGATATTTCTTGGTAAAATTGCACAAGGGGTTGTCTCAGAGTTTATGATAACCAAATTCAAAGCCCCTAGGCCTCTCGTACTCACAATACTCCTTGTGTTGTCTTGTATTGGTCACCTTTTAATTGCATTCAATGTTCCAAATGGTCTGTATGTAGCCTCCATTGTTGTTGGGTTTTGCTTTGGGGCAAACTGGCCAATACTTCAAACCATCGTATCTGAACTATTTGGGCTTAAACATTACTCAACATTGGCCAATATTGGGTCAATGGCGAGTCCAATTGGGTCATACATGCTCAGTGTGAGGGTTGCAGGGTATCTGTATGACAGAGAAGCCAGAAAGCAAATGGCAGAATTGGGGCTAAAAAGAAAGGTAGGAGAGGAATTGAACTGCAATGGGGGTGAGTGCTACAAATTGGCTTTCATTATAATCACTGCAGTTTGCATGCTTGGGGCGCTTGCCTCATTCATTTTGGTGCTTAGGACTAGACAGTTTTACAAAACTGATATATACAAGAAATTCACAGAAGAAGCTAGAACTGATGCTGAAACTGAAATGGTTGTGTCTCTGAACAAGATTGGACTACCTCCTACTTCGGATGAAGGCTAA 1740 0.4184 MMLYVPHPAGGVSSSKNIKGFALQVLTGRWFMMFASFMIMSVSGASYMFSLYSIEIKSSLGYDQSTLNLLSFFKDLGSNAGILSGLINEVTPPWVVLSIGAVCNFFGYFTIWLSVTKKFAKPHLWNMCLYIFIGGNSHCSTNTGVWVTSIKNFPGIRGVVIGILDGYLCLSAIIITQLCYAFFQNDSKSVILIMAWLPTATALIFLPVFRNRRRCVQQKKDSNAFYMFIYSTLALAVFFMMIIILQKCFKFTRSEYYVTTALMLLLLILPIAVVIAEEHKIWKSKQEHINYENPPMKSEQVPQKGVSCWQNIFRPPERGEDHTILQAIFSLDMVILFLATICGFGSNLTVVNNFSQIAKSLGYPAHTITTFISLMAIWIFLGKIAQGVVSEFMITKFKAPRPLVLTILLVLSCIGHLLIAFNVPNGLYVASIVVGFCFGANWPILQTIVSELFGLKHYSTLANIGSMASPIGSYMLSVRVAGYLYDREARKQMAELGLKRKVGEELNCNGGECYKLAFIIITAVCMLGALASFILVLRTRQFYKTDIYKKFTEEARTDAETEMVVSLNKIGLPPTSDEG* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2848 579 Pfam Nodulin-like 29 275 IPR010658 -
Lja2g2848 579 PANTHER MFS TRANSPORTER 13 571 - -
Lja2g2848 579 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 13 571 - -
Lja2g2848 579 SUPERFAMILY MFS general substrate transporter 232 541 IPR036259 -
Lja2g2848 579 Gene3D MFS general substrate transporter like domains 327 545 IPR036259 -
Lja2g2848 579 SUPERFAMILY MFS general substrate transporter 12 214 IPR036259 -
Lja2g2848 579 CDD MFS_Mch1p_like 28 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2848 Lja-Chr2 45851965 45854076 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2848 13 554 Nodulin-like Gene Family AT2G39210 55.240 0.0 648
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2848 - - gmx:100789645 819.69