Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2847 ATGTTCTCTGCACCACATTGGGGAGATGGTTGCAAAAGCATCAAAGGGTTTCCTCTCCAAGTCATAAAAGGGAGGTGGTTCATGATGTTTGCATCATTCATGATCATGTCAGTATCAGGGGCTAGCTACATGTTTAGCCTCTACTCCAGAGAAATCAAGTTTGTTCTAGGATATGATCAATCCACTCTCAATTTGTTAAGTTTCTTCAAGGACTTGGGTGCCCTCATAGGCATTCACTCAGGTGTAATAAACGAGGTCACACCTCCTTGGGTTGTTTTATCAATTGGTGGGGTTCTAAATTTTTTTGGGTATTTTATGATTTGGCTTGCTGTGAGTAAAAAAATTACAAGACCCCACCTGTGGCACATGTGTTTATACATTATTATTGGAGGCAATTCTCATTGCTTTACCAACACTGCAGTTATGGTGACCAGCGTAAAGAATTTCCCTGGGACCCGGGGCATTGTCTTAGGCATTGTAGGTGGGTATTTGAGTTTGAGTACAATAATCTTCACTCAACTATACTACACCTTCTTTGAAATCAACTCCAAATCTCTACTTTTACTCATGGCATGGCTACCAACTGCTACCTCTTTAATTTTCCTACCAGTTATCAAGAACCACAGGAGTATTCAACAGCCAAATGACTCCAAGGTTTTCCATAGGTTCATCTACATGATACTTGTTTTTGCAGGGTTTCTCATTGTTATAATCATTGTACAAAAATGTTTTAACATCACCCAGAGGGAGTATTATGTCACTTCCACTGTGATGCTTCACCTGCTTACCCTTCCACTTACTGTTGTTATTGTGGAAGAATACAAGATTTGGAAGAGCAAACAAGAACATATCAATTGTGAAAATCCTCCAAGCCCCACGGATATAGCAGCAGCAAGAACAACAACAACAACAACAAAGCCTAATCAAGTGAAGTCTGAGCAGGCTCCTCATGCAGAACAAACTATCCAAAACGGATTTTCCTGGTGGCAAAACATACTCAGGCCACCGAAAAGGGGTGAAGATCACACAATACTTCAAGCTATTTTTAGTCTTGATATGGTGATTCTTTTCTTAGCAACTATATTTGGGTATGGTGGCAACCTGACTGTGTTAAATAACATGAGTCAGATAGGAAAGTCCTTAGGATATCCTGCACATACTATAACCACATTTCTCTCCCTTATGTCAATTTGGATTTTTCTCGGTAAAATTTCACAAGGGGTTATCTCAGAATTTATGATTGACAAATTTAAAGCCCCTAGGCCTCTCATGCTCACGATACTCCTTGTATTGTCTTGTATTGGTCACCTGTTAATTGCATTCAATGTTCCAAATGGTCTTTATGTAACATCAATTGTTATTGGGTTTTGCTTTGGGGCAAACTGGCCAATACTTTTTTCCATCGTATCTGAATTGTTTGGTCTTAAACACTACTCAACATTGCATAATGTTGGGACAATAGCCGTTCCAATTGGGTCATACTTTCTCAGTGTGAGGGTGGCAGGGTATCTGTATGACAAGGAAGCCATGAAGCAAATGGAAGCATTGGGGCTACAAAGAAAACCAGGAGAGGAATTGAACTGCAATGGGGGCGAGTGCTACAAATTGGCTTTCATAATAATCACTGCAGTTTCCATGCTCGGGGCGCTTGTGTCATTCATTTTGGTGCTTAGGACTAAACAATTCTACGAAACTGATATATACAAGAAATTCAAAGAAGAATCTCGAACTGCGGAAACTGAAATGGTTGTCCCTAGACAAGAATGA 1767 0.4001 MFSAPHWGDGCKSIKGFPLQVIKGRWFMMFASFMIMSVSGASYMFSLYSREIKFVLGYDQSTLNLLSFFKDLGALIGIHSGVINEVTPPWVVLSIGGVLNFFGYFMIWLAVSKKITRPHLWHMCLYIIIGGNSHCFTNTAVMVTSVKNFPGTRGIVLGIVGGYLSLSTIIFTQLYYTFFEINSKSLLLLMAWLPTATSLIFLPVIKNHRSIQQPNDSKVFHRFIYMILVFAGFLIVIIIVQKCFNITQREYYVTSTVMLHLLTLPLTVVIVEEYKIWKSKQEHINCENPPSPTDIAAARTTTTTTKPNQVKSEQAPHAEQTIQNGFSWWQNILRPPKRGEDHTILQAIFSLDMVILFLATIFGYGGNLTVLNNMSQIGKSLGYPAHTITTFLSLMSIWIFLGKISQGVISEFMIDKFKAPRPLMLTILLVLSCIGHLLIAFNVPNGLYVTSIVIGFCFGANWPILFSIVSELFGLKHYSTLHNVGTIAVPIGSYFLSVRVAGYLYDKEAMKQMEALGLQRKPGEELNCNGGECYKLAFIIITAVSMLGALVSFILVLRTKQFYETDIYKKFKEESRTAETEMVVPRQE* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2847 588 SUPERFAMILY MFS general substrate transporter 24 561 IPR036259 -
Lja2g2847 588 CDD MFS_Mch1p_like 24 549 - -
Lja2g2847 588 Gene3D MFS general substrate transporter like domains 349 565 IPR036259 -
Lja2g2847 588 PANTHER MFS TRANSPORTER 8 585 - -
Lja2g2847 588 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 585 - -
Lja2g2847 588 Pfam Nodulin-like 25 270 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2847 Lja-Chr2 45690117 45692266 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2847 13 574 Nodulin-like Gene Family AT2G39210 54.626 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2847 - - gmx:100789645 814.298