Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2845 ATGATGTTCTGTACACTACATCCAGGAAATGGTTGCAAAAACATCAAAGGATTTTCCCTCCAAGTCCTAAAAGGGAGGTGGTTCATGATGTTTGCATCATTTATGATGATGTTAGTATCAGGAGCTAGCTACATGTTTAGCCTCTACTCCAGAGAAATCAAGTTTGCTCTCGGGTATGACCAATCCACTCTCAACTTGTTAAGTTTCTTCATGGACTTAGGTTCCCACATAGGCATTCTCTCAGGTCTAATAAACGAGGTCACACCTCCTTGGGTTGCGTTATCAATGGGTGGGGTTTTCAATTTTTTTGGTTATTTCATGATTTGGCTTGCTGTGACTAAAAAAATTGCAAATTCCCAACTGTGGCACATGTGTTTGTACATTTTTATTGGAGGCAATGCTCATTGCTTTACCAACACTGTAGTTCTGGTGACCAGTGTAAAGAACTTCCCTGGGATCCGGGGCATTGTCATAGGCATTGCAGAGGGGTATTTGACTTTGAGTGCAATAATCTTCACTCAGCTCTACTATGCCTTCTTCGAAAATGATTCCAAATCTATGATTTTGCTCATGGCATGGCTACCAACTGCGACTGCTTTAATTTTCCTACCAGTTATCAAGAACCACAGGAGTATTCAACAGCCAAATGACTCCAAAGTTTTCCATAGGTTGATCTACCTGATACTTGTTCTTGCAGGGTTCCTCATGATTATTATTGTTGTACAAAAAATTTTCAACTTCACTCAGACTGAGTATTATGTCACTTCTACTGTGATGATTCATTTGCTTACCCTTCCACTTACTGTTGTTATTGTGGAAGAATACAAGGTTTGGAAGAGCAAACAAGACCATATCAATTGTGAAAATCCTCCAAGCCCCACGGATGTAGCAGCAACAACAACAACGAAATCTAATCAAGTGAAGTATGAGCAGGCTCCTCATGCAGAACAGGCTCCCCGAAAAGGAGTTTCCTGTTTGCAAAACATTCTCAGGCCGCCGGAAAGGGGTGAAGATCATACAATACTTCAAGCCATTTTCAGCCTTGACATGGTAATTCTATTCCTTGCTACTATATGTGGATTTGGTAGCAACTTAACCGTGGTAAACAATTTGAGTCAGATTGCAAAGTCTTTAGGCTACCCTGCACACACCATAACCACATTCATCTCCCTCATGGCAGTTTGGATTTTTCTAGGTAAAATTGCACAAGGGGTTGTATCAGAATTTATGATAACCAAATTGAAAACCCCTAGGCCTCTCATGCTCACAATACTCCTTGTTTTGTCGTGTATTGGTCACCTTTTAATTGCATTCAATGTTCCAAATGCTCTATATATAGCCTCAATTGTTATTGGGTTTTGCTTTGGGGCAATCTGGCCAATTCTTTTTTCCATCATATCTGAATTGTTTGGCCTCAAACATTACTCAACATTGTATAATGTTGGGACATTAGCGGTTCCAATTGGGTCATACTTGTTCAATGTGATGGTCGTAGGGTATCTGTATGACAAGGAAGCCAGAAAGCAAATGAAAGCATTGGGGCTAGAAAGAAAGCCAGGAGAGGAATTGAACTGCAATGGGGGCGAGTGCTACAAATTGTCTTTCATTATAATAACTGTAGTTTGTTTGCTTGGGGCACTTGTATCATTCATTTTGGCGCTTAGGACTAAAAAATTCTACAAAACTGACATATACAAGAAATTCAACGAAGAATCTAGAACTGCAGAAATTGAAAGTGTTGTTCCTCAACAAGAATGA 1758 0.3993 MMFCTLHPGNGCKNIKGFSLQVLKGRWFMMFASFMMMLVSGASYMFSLYSREIKFALGYDQSTLNLLSFFMDLGSHIGILSGLINEVTPPWVALSMGGVFNFFGYFMIWLAVTKKIANSQLWHMCLYIFIGGNAHCFTNTVVLVTSVKNFPGIRGIVIGIAEGYLTLSAIIFTQLYYAFFENDSKSMILLMAWLPTATALIFLPVIKNHRSIQQPNDSKVFHRLIYLILVLAGFLMIIIVVQKIFNFTQTEYYVTSTVMIHLLTLPLTVVIVEEYKVWKSKQDHINCENPPSPTDVAATTTTKSNQVKYEQAPHAEQAPRKGVSCLQNILRPPERGEDHTILQAIFSLDMVILFLATICGFGSNLTVVNNLSQIAKSLGYPAHTITTFISLMAVWIFLGKIAQGVVSEFMITKLKTPRPLMLTILLVLSCIGHLLIAFNVPNALYIASIVIGFCFGAIWPILFSIISELFGLKHYSTLYNVGTLAVPIGSYLFNVMVVGYLYDKEARKQMKALGLERKPGEELNCNGGECYKLSFIIITVVCLLGALVSFILALRTKKFYKTDIYKKFNEESRTAEIESVVPQQE* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2845 585 PANTHER MFS TRANSPORTER 9 583 - -
Lja2g2845 585 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 583 - -
Lja2g2845 585 SUPERFAMILY MFS general substrate transporter 25 559 IPR036259 -
Lja2g2845 585 Pfam Nodulin-like 26 271 IPR010658 -
Lja2g2845 585 CDD MFS_Mch1p_like 25 546 - -
Lja2g2845 585 Pfam Major Facilitator Superfamily 353 555 IPR011701 GO:0022857|GO:0055085
Lja2g2845 585 Gene3D MFS general substrate transporter like domains 345 562 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2845 Lja-Chr2 45601362 45603373 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2845 7 571 Nodulin-like Gene Family AT2G39210 55.106 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2845 - - gmx:102661181 809.29