Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2844 ATGATGTTTTGTGCACCACATCCAGGAAATAGTTGTAAGAATTTCAAAGGCTTTGCTCTCCAAGTCCTACAAGGGAGATGGTTCATGATGTTTGCATCATTTATGATCATGGCAGTATCAGGAGCTAGCTACATGTTCAGCCTCTACTCCAGAGAAATCAAGTTCTCTCTCGGGTATGACCAATCCACTCTCAATTTGTTAAGCTTCTTCAAGGACGTGGGTGCCTACATAGGCGTTCTCTCTGGTCTAATCAATGAGGTAACGCCTCCTTGGGTTGTGTTATCAATGGGTGCTGTTCTAAATTTTTTTGGGTTTTTCATGATTTGGCTTGCGGTGGCAAAAAAAATAGCAAATCCCCGCCTGTGGCACTTGTGCTTGTACATCGTTATTGGAAGCAATTCTCATTGTTTTACCAACACTGCAGTTATGGTGACCAGCGTAAAGAATTTCCCGGGCATCCGCGGCATTGTATTAGGCATTTTGGGTGGGTATGTAAGTTTGAGTGCAATAATCATCACTCAATTGTACTATGCCTTCTTTATAAATGACTCCAAATCTATGATTTTGATCATGGCATGTCTACCAACAGCCACTGCTTTGATTCTCCTACCAGTTATAAAGAACCACAAGAGTATTCAACAGAAAAATGACTCCAAAGTTTTCTATAGGTTCATCTACTTGGTACTAGCTCTTGCAGGGTTCCTCATGATTATGATCATTTTGCAAATATCTTTCAACTTCACCCAGAGTGAGTATTATGCCACTACCACTGTGATGCTTCTCTTACTTACCCTTCCACTTGCTGTTGTTATTGTGGAAGACTGCAAGATTTGGAAGAGCAAACAGGAACTTATCAATTGTGAAAATCCTCCGAGACCCGTGGATACAACAACAAAATCTAATGAATTGAAGTCTGAACAAACTATCCCTGAAGGACTTTCCTGTTGGCAAAATATTTTGAGGCACCCGGAAAGAGGTGAAGATCATACAGTACTTCAAGCCATTTTTAGCCTTGATATGGTTATTCTTTTCTTTGCTACTGTATGTGGATTTGGTAGCAACCTGACTGTGTACAATAACTTGAGTCAGATTGGGAAGTCCTTAGGATATCCTTCATATACTATAACCACATTTGTCTCCCTTATGTCCATTTGGATTTTTCTCGGTAAAATTGCACAAGGGGTGCTCTCAGAATTTATGATAACAAAACTGAAACTCCCTAGGCCTCTCATGTTCACGATAGTCCATGTATTGTCTTGTATTGGTCACCTTTTAATTGCTTTCAATGTTCCAAATGGTCTATACGCAGCCTCAATTTTTATTGGGTTTTGCTTGGGAGCAAGCTGGCCAATAATTAATTCCCTCATATCTGAATTGTTTGGTCTTAAACATTACTCAACATTGTACAATGTTGGGACAGTAGCAAGTCCAATTGGGTCATACTTACTCAATGTGAAGGTCGCAGGGTATCTGTATGACAGGGAAGCTAGAAGGCAAATGGCAGCATTGGGGCTACAAAGAAAGCCAGGAGATGAATTGAACTGCAATGGGAGTGACTGCTACAAGTTGGCTTATATCATAATCACTGCAGTTTGCTTATTTGGGGCGCTTGTGTCATTCATTTTGGTGCTTAGGACCAGACAGTTCTACAAAACTGACATATACAAGAAATTCACAGAAGAACCTAGGACTGCTGAAACTAAAATGGTTATCCCTGGAAAAGATTGA 1728 0.4034 MMFCAPHPGNSCKNFKGFALQVLQGRWFMMFASFMIMAVSGASYMFSLYSREIKFSLGYDQSTLNLLSFFKDVGAYIGVLSGLINEVTPPWVVLSMGAVLNFFGFFMIWLAVAKKIANPRLWHLCLYIVIGSNSHCFTNTAVMVTSVKNFPGIRGIVLGILGGYVSLSAIIITQLYYAFFINDSKSMILIMACLPTATALILLPVIKNHKSIQQKNDSKVFYRFIYLVLALAGFLMIMIILQISFNFTQSEYYATTTVMLLLLTLPLAVVIVEDCKIWKSKQELINCENPPRPVDTTTKSNELKSEQTIPEGLSCWQNILRHPERGEDHTVLQAIFSLDMVILFFATVCGFGSNLTVYNNLSQIGKSLGYPSYTITTFVSLMSIWIFLGKIAQGVLSEFMITKLKLPRPLMFTIVHVLSCIGHLLIAFNVPNGLYAASIFIGFCLGASWPIINSLISELFGLKHYSTLYNVGTVASPIGSYLLNVKVAGYLYDREARRQMAALGLQRKPGDELNCNGSDCYKLAYIIITAVCLFGALVSFILVLRTRQFYKTDIYKKFTEEPRTAETKMVIPGKD* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2844 575 Pfam Nodulin-like 26 271 IPR010658 -
Lja2g2844 575 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 571 - -
Lja2g2844 575 CDD MFS_Mch1p_like 25 536 - -
Lja2g2844 575 Gene3D MFS general substrate transporter like domains 336 552 IPR036259 -
Lja2g2844 575 Gene3D MFS general substrate transporter like domains 21 217 IPR036259 -
Lja2g2844 575 PANTHER MFS TRANSPORTER 9 571 - -
Lja2g2844 575 SUPERFAMILY MFS general substrate transporter 26 548 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2844 Lja-Chr2 45476654 45478856 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2844 5 561 Nodulin-like Gene Family AT2G39210 55.732 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2844 - - gmx:100789645 789.645