Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2798 ATGGCCATAACACCTTTAGGTAGTACTTCTGCATCACAATGGGGAGTTCGTCCTCAGCTATTGCTCAGGTCCAGTTTGACAGGCAAGGGTGCATCATCTAGCCACAATGTTACAACCAGGGTGAGCTTCATGGCTGCCCCAAGTTCTAGTTTTTTGTCTCCAGATTCCTTGCATATACTATTTAACGCTGGTCTCTATCAATCTTTGAAATGTCGGAAGGGGTCACGGTTGATTGTAAGAGCAAATACAGATTATTATTCTGTCCTTGGGGTTTCAAGAAATGCTAGTAAATCTGAAATTAAGAGTGCTTATCGGAAGCTTGCCCGCACTTACCATCCTGATGTAAACAAAGAACCTGGAGCGGAAACTAAATTTAAGGAGATCAGCAATGCTTATGAGGTCTTATCAGATGATGAGAAACGATCCATTTATGACAGATATGGAGAGGATGGGCTTAAGGGTTCTGGATTGGGCACAGGGGATTTCAGCAATCCTTTCGATCTATTTGATTTGTTTGAAAAGATGAATCGTGGTGCAAGTCCTAGAGGTTCTTGGAATGGAGCAATTGCAGGCGAAGATGAATATTACAGTCTTGTTTTGAACTTTAAAGAAGCAGTTTTTGGCATAGAGAAAGAGATAGAGATAAGCCGATTAGAGAGCTGTGGAACTTGCAATGGTTCTGGTGCTAAACCTGGGACTACACCATCCAAATGTGGCACTTGTGGAGGTCAAGGCCAAGTCATCTCATCAACAAGGACTCCATTAGGTATCTTCCGGCAGACCATGACGTGCTCGTCATGCAATGGGATGGGGGAAATTTCAACACCTTGCAGTACATGTTCTGGGGATGGTCGAGTGAGGAAATCAAAGCGGATAAGCCTGAAAGTCCCAGCTGGTGTGGATTCGGGTAGCCGTTTAAGGGTTAGAAACGAAGGAAACGCCGGAAGGCGAGGGGGTCCTCCTGGCGACCTCTTTGTTGTTATTGAAGTTATCCCAGATCCTGTCCTCAAAAGAGACGACATCAACATCTTGTACACCTGCAAGGTTTCTTACATTGATGCAATCTTGGGGACTACAATTAAGGTTCCTACAGTAGATGGAATGGTGGATTTGAAAATTCCATCAGGGACCCAACCCAACACTACACTTGTTATGGCTAAGAAAGGTGTTCCCCTGCTGAATAAAAACAACATGAGAGGAGATCAATTTGTTCGTGTACAAGTTGAAATTCCTAAGAGACTGAGCAGTGATGAGAGAAAGCTTATAGAGGAACTTGCTGATTTAAGCAAAGACAAGACTACCAGCAGTACCAGATAA 1317 0.4381 MAITPLGSTSASQWGVRPQLLLRSSLTGKGASSSHNVTTRVSFMAAPSSSFLSPDSLHILFNAGLYQSLKCRKGSRLIVRANTDYYSVLGVSRNASKSEIKSAYRKLARTYHPDVNKEPGAETKFKEISNAYEVLSDDEKRSIYDRYGEDGLKGSGLGTGDFSNPFDLFDLFEKMNRGASPRGSWNGAIAGEDEYYSLVLNFKEAVFGIEKEIEISRLESCGTCNGSGAKPGTTPSKCGTCGGQGQVISSTRTPLGIFRQTMTCSSCNGMGEISTPCSTCSGDGRVRKSKRISLKVPAGVDSGSRLRVRNEGNAGRRGGPPGDLFVVIEVIPDPVLKRDDINILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPSGTQPNTTLVMAKKGVPLLNKNNMRGDQFVRVQVEIPKRLSSDERKLIEELADLSKDKTTSSTR* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2798 438 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 32 438 - -
Lja2g2798 438 Pfam DnaJ C terminal domain 196 411 IPR002939 -
Lja2g2798 438 ProSiteProfiles Zinc finger CR-type profile. 208 289 IPR001305 GO:0031072|GO:0051082
Lja2g2798 438 CDD DnaJ 84 137 IPR001623 -
Lja2g2798 438 Hamap Chaperone protein DnaJ [dnaJ]. 81 432 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Lja2g2798 438 Pfam DnaJ domain 84 145 IPR001623 -
Lja2g2798 438 Pfam DnaJ central domain 221 284 IPR001305 GO:0031072|GO:0051082
Lja2g2798 438 Gene3D - 221 284 - -
Lja2g2798 438 TIGRFAM DnaJ_bact: chaperone protein DnaJ 84 427 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Lja2g2798 438 PANTHER BNAA01G34580D PROTEIN 32 438 - -
Lja2g2798 438 CDD DnaJ_C 192 414 - -
Lja2g2798 438 Gene3D - 331 438 - -
Lja2g2798 438 Gene3D DnaJ domain 81 184 IPR036869 -
Lja2g2798 438 SUPERFAMILY HSP40/DnaJ peptide-binding domain 190 344 IPR008971 GO:0006457|GO:0051082
Lja2g2798 438 ProSitePatterns Nt-dnaJ domain signature. 125 144 IPR018253 -
Lja2g2798 438 Gene3D - 191 326 - -
Lja2g2798 438 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 208 288 IPR036410 -
Lja2g2798 438 ProSiteProfiles dnaJ domain profile. 84 148 IPR001623 -
Lja2g2798 438 CDD DnaJ_zf 221 284 IPR001305 GO:0031072|GO:0051082
Lja2g2798 438 SUPERFAMILY Chaperone J-domain 80 170 IPR036869 -
Lja2g2798 438 PRINTS DnaJ domain signature 104 119 IPR001623 -
Lja2g2798 438 PRINTS DnaJ domain signature 140 159 IPR001623 -
Lja2g2798 438 PRINTS DnaJ domain signature 86 104 IPR001623 -
Lja2g2798 438 PRINTS DnaJ domain signature 120 140 IPR001623 -
Lja2g2798 438 SUPERFAMILY HSP40/DnaJ peptide-binding domain 336 422 IPR008971 GO:0006457|GO:0051082
Lja2g2798 438 SMART dnaj_3 83 140 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2798 Lja-Chr2 43288819 43295908 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2798 85 147 C2H2 Transcription Factor Family AT1G74250 43.478 2.01e-09 57.8