Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2786 ATGGCATCAAGCAATATCCAGAATTGGGAAGATCATGGACAAAGGACGATTCCCCATCATACTTGTACGATTTCCTCTCCAAAACTGTTTTGTTGTATCAAACAAGCCAACAGATGGGAAGCGTTTTATCTGATCCCTTGGGAAGCTTTTACTCTTGCAAGCTTCTTTGAACGCTACAAGAACTTGGACCTTGCTAGGAATTTTCAATTTCCAACCTTGAGACAGAATAGTCTTGAGACTAAGATAGAGAAGTCAAGGAAGAAACTGAAGGAGATAAATAATAGAGCTAAGAAGATTTGTGGAGTAAATAAGGTAATTTTCCTTTCTCAACTAATATCAAATTAG 345 0.3739 MASSNIQNWEDHGQRTIPHHTCTISSPKLFCCIKQANRWEAFYLIPWEAFTLASFFERYKNLDLARNFQFPTLRQNSLETKIEKSRKKLKEINNRAKKICGVNKVIFLSQLISN* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2786 114 Coils Coil 75 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2786 Lja-Chr2 42613224 42616877 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2786 59 105 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 53.061 3.23e-07 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2786 K02974 - lja:Lj0g3v0040899.1 58.5362