Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2780 ATGGGTTGGCCTTATATTGGAGAGACCTTCCAAACGTATTCTCAAGACCCTAGTGTCTTCTTTACCTCAAAAATCAAGAGGTATGGATGGATATTCAAGTCTCACATTCTGGGTTGTCCTTGTGTGATGATTTCAAGCCCAGATGCTACGAAGTTTGTGCTGAACAAAGCTCAACTCTTCAAACCAACATTTCCTGCTAGAGCATACCATGCTAACCTGAGGAGGCTTGTCCTTCGCACCGTCATGCCTGAGGCCATCAAGAACATCGTCTCAAACATTGAATCCATTGCCCAAAGTAGCCTCAAATCCTGGGAAGGAAAGTCAATCACCACTTTCCTTGAAATGAAAACATATACCTTCAATAATGCCCTGCTTTCAATTTTTGGAAATGATGAAACTCATTACAGAGAGGATCTGAAACGATGCTACTACACCCTTGAGAAAGGGTACAATTCAATGCCCATAAATCTTCCAGGCACACTTTTCCATAAGGCAATGAAGGAGAGGATAGAGCTCGCGCAGATTGTAGCAGATATTATTGCCATAAGGAGGAGCAAGAACCGAGATTACAATGACTTGTGGGGATCTTTCATGGAAGAGAAATCAGGCCTCACCGATGACCAAATCGCAGATAACATGATTGGTGTCATTTTTGCTGCTCGTGACACCACTGCCAGCGCTCTTACATGGATCATCAAGTACCTTGATGAGAATCCCAATGTCTTAGAAGTCGTCACCGAAGAGCAAGAGGCTATATTGAAAGGCAAGGAAGAAAGAGGTGAATATATTGGTTTGAATTGGGGAGACACAAAAAACATGCCATTGACTTCAAGGGTGATACAGGAGACTCTAAGAGTTGCCTCTATTTTGTCTTTCACATTCAGAGAAGCAATAGAGGATGTTGAATATGAAGTGTCTCATACCAAAAGGGTGGAAAGTATTACCTCTTTTCAGAAACTCATACCAAAAGGGTGGAAAGTATTACCTCTTTTCAAAAACATACATCACAGTCCAGATAATTATACAGATCCTGAGAAATTTGATCCTTCAAGATTTGAGGTTGCTCCGAAATCCAACACTTTTATGCCATTTGGCACTGGGATCCATGCATGTCCAGGCAATGAATTGGCAAAGTTAGAGATTTTGGTGCTTATTCATCATCTGACCACAAAGTACAGGTGGTCTGTAATAGGTCCAAAAAGTGGGATTCAGTATGGTCCTTTTGCTCTTCCCCAAAGTGGCTTGCCAATCGCATTTACCGCAAATGAATATCGCCTCAACAAAAAGACTAACTATGGCATGGAAGAAACTTTCTAA 1317 0.4169 MGWPYIGETFQTYSQDPSVFFTSKIKRYGWIFKSHILGCPCVMISSPDATKFVLNKAQLFKPTFPARAYHANLRRLVLRTVMPEAIKNIVSNIESIAQSSLKSWEGKSITTFLEMKTYTFNNALLSIFGNDETHYREDLKRCYYTLEKGYNSMPINLPGTLFHKAMKERIELAQIVADIIAIRRSKNRDYNDLWGSFMEEKSGLTDDQIADNMIGVIFAARDTTASALTWIIKYLDENPNVLEVVTEEQEAILKGKEERGEYIGLNWGDTKNMPLTSRVIQETLRVASILSFTFREAIEDVEYEVSHTKRVESITSFQKLIPKGWKVLPLFKNIHHSPDNYTDPEKFDPSRFEVAPKSNTFMPFGTGIHACPGNELAKLEILVLIHHLTTKYRWSVIGPKSGIQYGPFALPQSGLPIAFTANEYRLNKKTNYGMEETF* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2780 438 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 364 373 IPR017972 GO:0005506|GO:0016705
Lja2g2780 438 Pfam Cytochrome P450 3 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2780 438 PRINTS P450 superfamily signature 219 236 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2780 438 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2780 438 PRINTS P450 superfamily signature 278 289 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2780 438 PRINTS P450 superfamily signature 362 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2780 438 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 1 420 - -
Lja2g2780 438 PANTHER CYTOCHROME P450 26 1 420 - -
Lja2g2780 438 PRINTS E-class P450 group IV signature 210 236 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2780 438 PRINTS E-class P450 group IV signature 19 42 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2780 438 PRINTS E-class P450 group IV signature 371 389 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2780 438 PRINTS E-class P450 group IV signature 355 371 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2780 438 PRINTS E-class P450 group IV signature 273 289 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2780 438 Gene3D Cytochrome P450 1 421 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2780 438 SUPERFAMILY Cytochrome P450 2 420 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2780 Lja-Chr2 42419664 42422414 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2780 1 422 Cytochrome P450 AT4G19230 66.287 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2780 K09843 - gmx:100780737 660.218