Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2779 ATGGCTGCTTCGACAATGGCTCTCTCTTCACCATCAGTGGCCGGGAAGGCAATCAAGCTTTCCCCCTCCACCCAGGATAGTGGAAGGATCACCATGAGGAAAACAGGCGCCAAATCCAAACCTGTTTCTTCTGGAAGCCCATGGTACGGTCCAGACCGTGTCAAGTACTTGGGCCCATTCTCTGGTGAGTCTCCATCCTACCTTACTGGTGAGTTCCCAGGTGACTATGGCTGGGACACTGCTGGGCTTTCTGCTGACCCAGAGACATTTGCCAAGAACCGTGAACTTGAGGTCATCCACAGTAGATGGGCCATGTTGGGAGCCTTGGGCTGTGTTTTCCCTGAGCTCTTGGCCCGTAACGGTGTCAAATTCGGTGAGGCTGTGTGGTTCAAGGTCGGGTCTCAAATATTCAGCGAGGGCGGACTTGACTACTTGGGCAACCCAAGTCTATTCCATGCACAAAGCATTCTCGCAATCTGGGCCACCCAAGTTATCTTGATGGGTGCTGTTGAAGGTTACCGTATTGCAGGTGGGCCACTTGGTGAGGTGACTGACCCACTCTACCCAGGAGGAAGCTTTGATCCATTGGGCCTTGCTGATGACCCAGAGGCTTTTGCAGAGTTGAAGGTGAAAGAGCTCAAGAATGGTAGATTAGCGATGTTCTCTATGTTTGGATTCTTTGTTCAAGCTATTGTAACCGGAAAGGGGCCTTTAGAGAACCTTGCTGACCACCTTGTTGACCCAGTCAACAACAATGCTTGGGCCTATGCCACCAACTTTGTCCCTGTAAAGTGA 795 0.5145 MAASTMALSSPSVAGKAIKLSPSTQDSGRITMRKTGAKSKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKVGSQIFSEGGLDYLGNPSLFHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLVDPVNNNAWAYATNFVPVK* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2779 264 SUPERFAMILY Chlorophyll a-b binding protein 47 261 - -
Lja2g2779 264 MobiDBLite consensus disorder prediction 1 42 - -
Lja2g2779 264 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 1 264 - -
Lja2g2779 264 Gene3D Chlorophyll a/b binding protein domain 55 257 - -
Lja2g2779 264 Pfam Chlorophyll A-B binding protein 65 230 IPR022796 -
Lja2g2779 264 MobiDBLite consensus disorder prediction 1 45 - -
Lja2g2779 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 264 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2779 Lja-Chr2 42411292 42412141 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2779 1 264 Chloroplast and Mitochondria Gene Families AT1G29930 88.433 5.26e-171 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2779 K08912 - nnu:104587699 504.982