Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2777 ATGGCTACTTCAACAATGGCTGTCTCTTCTCCATCATTGGCTGGTCAGGCAATCAAGCTTGCCCCCTCCATTCAGGACACTGGAAGGATCACCATGAGAAAAACAACCACCAAATCCAAACCCGTTTCTTCTGGAAGTCCATGGTACGGCCCAGACCGTGTCAAATACTTGGGCCCATTCTCAGGTGAGTCCCCATCCTACCTCACTGGTGAATTCCCAGGCGACTATGGTTGGGACACTGCCGGACTTTCTGCTGACCCAGAGACATTTGCGAAAAACCGTGAACTTGAGGTCATTCACAGTAGATGGGCCATGTTGGGAGCCCTAGGCTGTGTCTTCCCCGAGCTCTTGGCCCGCAACGGTGTGAAGTTTGGTGAGGCTGTGTGGTTCAAGGCCGGGTCCCAAATTTTCAGTGAAGGTGGACTTGACTACTTGGGTAACCCGAGCCTAGTCCATGCACAAAGCATTCTCGCAATCTGGGCCACCCAAGTTATCTTGATGGGTGCCGTTGAAGGTTACCGTATTGCTGGTGGGCCACTTGGTGAGGTGACTGACCCACTGTACCCAGGTGGCAGCTTTGACCCATTGGGCCTTGCTGACGACCCAGAAGCTTTTGCAGAATTGAAGGTGAAAGAACTAAAAAATGGTAGGTTAGCCATGTTCTCCATGTTTGGTTTCTTTGTTCAAGCTATTGTTACTGGAAAGGGACCTTTGGAGAACCTTGCAGACCACCTTGCTGACCCAGTCAACAACAATGCTTGGGCCTTTGCCACAAACTTTGTCCCTGGAAAGTAA 795 0.5094 MATSTMAVSSPSLAGQAIKLAPSIQDTGRITMRKTTTKSKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2777 264 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 1 264 - -
Lja2g2777 264 SUPERFAMILY Chlorophyll a-b binding protein 47 261 - -
Lja2g2777 264 Pfam Chlorophyll A-B binding protein 65 230 IPR022796 -
Lja2g2777 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 264 IPR001344 GO:0009765|GO:0016020
Lja2g2777 264 Gene3D Chlorophyll a/b binding protein domain 55 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2777 Lja-Chr2 42398210 42400923 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2777 1 264 Chloroplast and Mitochondria Gene Families AT1G29930 88.060 1.63e-172 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2777 K08912 - jre:109014159 509.22