Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2769 ATGGAAATGGAGATGGAGATGAAATGCATGGAAGACATTGACATAGCAACTGACCTAACCCCAACACTCTCCCCTCTCTCTTTCTCTCTCCACAATTCCCATCTCCACACTCACTGCTCCGCATGTTTCTCTCCCCTCCCCAATCCCAATCCCCATTCCCTCTTTTACTGCTCCCCTCTCTGCTCCGCCGCACATTCCGCTCTCCGCCTCTCCTCCGCCGACTCCTCTCTCCTCCGCACCGCCCTCCGCCTCCTCCTCCACCACCGTCCCTCCTCCACTGGCCGGATCGCCGGACTGCTCTCTAACCGCCACCTGCTGACGTGCCCTAACCTCTCTCCCTCCCACGATGACGTGTCGGTCTCCGATAGCGTCAGGGCCATGGCCGCCGCGATTGCGAAACAACGCGGCGGCCGCGAACAGGACGACGCCGTTCTGGAGGACGCCACTGTTGCTCTCTGCGCTGTGCTAACGAACGCCGTGGAGGTGCACGATAGCCAAGGGTGCGCCCTCGGGATTGCGGTTTTCGAACCTGCGTTCTCTTGGATCAACCACAGTTGTTCACCCAATGCGTGTTACCGCTTCACCTTCAAGTCCCTTTCTTCTGATGAAGCGAAGCTTCGCATTGCTCCGTTCAATTCTCAACAATCAATGATAGATAGTGAGGTTTGTGGTGGCAGTAGTGAATTTGGAAAAGAATGGGAACTGGGCTATGGTCCAAGATTGATTGTGAGGAGTATCAAGAGAATAAACAAGGGAGATGAGGTGACTGTAGCATATACTGACCTCTTGCAACCTAAGGCAATGAGGCAATCAGAGTTATGGTCAAAGTACCGGTTTAATTGTTGTTGCCAACGATGTAGTGCCCTGCCCTTCACATATGTGGATCATGCATTGCAAGAAATTTCTGTTTATAGTCGTGATTCATCTGGTTCATGTTCCAATTACGAGCTCTTCAGAGACATGGTTGATAGTAGACTAGCCGAGTGCATTGACAATGTTATATCAGAGTATCTTTCCGTTGGTGATCCTGACTCTTGTTGTGAAAAACTTGAGAAGATACTTATGCTAGGTCTAGATGAGCAGTTAGAAATTGGTGAAGGAAAACAGCATTCAAAATTCATCCTGCATCCCCTACATCACCTTTCTCTAATTGCTTACACAACACTGGCTTCAGCATATAAAGTTCGCGGGAGTGATTTATTGTGTGTAGGTTCTGAAATCAATCTAGATCAGTTTGAAGCTTTTGACATGAGCAGGATCAGTGCAGCATATTCTTTGCTACTTGCAGGTGCAACTCATCATCTCTTCAAATTTGAATCCTCACTGATTGCTTCAATTGCAAATTTTTGGACTGGTGCTGGTGAATCTTTGTTATCTCTCACCAGAAATTCAGGATGGAATAAGTTTGTTGAATTGGGTCTGGTTGTTTCAAAACTTCCTTCTATCAGGATGTTAAAATGCTCCAAGTGTTCATTGATGGTTAGATTTAGAGCTTGTATATCAAATGGTCAAATTAAAAGTGCAGATTTTGAGACTGTATCGAATGAGTTCCTTCACTGCGTCTCACATATTACTCAGAAAGTTTGGAGTGTACTTGTCTATGGTTGCAATTTTATGAGATCATGTAAAGATCCTATCAATTTCAGCTGGCTATGGTCTACAAAAAATTCCATTACAGTTGATATTGGGCCTCATGGTAATAAAACTAACACAGGTAACACTCGTGAATCTGAGAATAACATCCATATTTGTGAAGGAAAAGCTTACAATGATCATGTAGTAAATGATATTTTTTTGCTAAGTGTACACTGCTTAACATATGGAGGATTGTTGGCTAGTATATGTTATGGTCCCCATTCCCATTTGTCTTGCCATGTTCAAAATATTCTTGGTGAATTATATTGTCATGATGAAATTTGA 1920 0.4479 MEMEMEMKCMEDIDIATDLTPTLSPLSFSLHNSHLHTHCSACFSPLPNPNPHSLFYCSPLCSAAHSALRLSSADSSLLRTALRLLLHHRPSSTGRIAGLLSNRHLLTCPNLSPSHDDVSVSDSVRAMAAAIAKQRGGREQDDAVLEDATVALCAVLTNAVEVHDSQGCALGIAVFEPAFSWINHSCSPNACYRFTFKSLSSDEAKLRIAPFNSQQSMIDSEVCGGSSEFGKEWELGYGPRLIVRSIKRINKGDEVTVAYTDLLQPKAMRQSELWSKYRFNCCCQRCSALPFTYVDHALQEISVYSRDSSGSCSNYELFRDMVDSRLAECIDNVISEYLSVGDPDSCCEKLEKILMLGLDEQLEIGEGKQHSKFILHPLHHLSLIAYTTLASAYKVRGSDLLCVGSEINLDQFEAFDMSRISAAYSLLLAGATHHLFKFESSLIASIANFWTGAGESLLSLTRNSGWNKFVELGLVVSKLPSIRMLKCSKCSLMVRFRACISNGQIKSADFETVSNEFLHCVSHITQKVWSVLVYGCNFMRSCKDPINFSWLWSTKNSITVDIGPHGNKTNTGNTRESENNIHICEGKAYNDHVVNDIFLLSVHCLTYGGLLASICYGPHSHLSCHVQNILGELYCHDEI* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2769 639 CDD SET_SMYD 139 286 - -
Lja2g2769 639 SUPERFAMILY SET domain 161 287 IPR046341 -
Lja2g2769 639 Pfam SET domain 177 259 IPR001214 GO:0005515
Lja2g2769 639 PANTHER PROTEIN SET DOMAIN GROUP 41 5 631 - -
Lja2g2769 639 Gene3D SET domain 123 289 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2769 Lja-Chr2 42198626 42201900 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lja2g2769 SET 2.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2769 - - aprc:113867790 822.002