Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2758 ATGAAGAGATTAATGGCGATGATGGAAAAACATAAACCATACATTGCAATGCTCTTTATTCAATTTGTATATGCAGGAATGGCTTTGTTGTCTAAGGTTGCAATTTCAAAGGGAATGAGCCCTTATGTGTTTGTTGTTTATCGACAAACCTTTGCAACACTTGCCTTATCCCCATTTGCTTTCTTTGACAGTAAGCATGCTGCTCCTCTGTCATGCAACTTATTGTGCAAATTGTTTCTAGTTTCCCTTGTTGGGCTAACAGCAAGTTCAAACCTTTACTATGTTTCCATCAACTACACCTCTGCCACATTTGCTGCAGCCAGCACAAACACAATCCCTTCCATCACTTTCATCCTGGCTGCTTTACTTAGGGTGGAAAGCATTTCCATAAAACATCTTCATGGAGTGGCCAAGATTTTGGGTTCTGTTCTAAGCCTCACAGGGGCTGTAACCTTTGCTTTAGTCAAAGGACCTCCTCTACATTTTATCAGAGAAAATCAGAATCATGGTTCTCACATATTATCAATGGTTCACTCCAAAGGGGATAGTATTAAAGGCTCTATTATGATGCTATCAGCAAACGCTACTTGGTCCTTGTGGCTTATTTTGCAGGGATTTATTGTAAAGCAATACCCGGCAAAATTTCGCCTTACCATTATACAGTGCTTTTTTAGCTTCATACAGTCAGCAATTTTGGCTGTTGCAGTGGAGAGGAATAATCCTCATGCATGGAGGCTTGGATGGGATATTCATCTTCTTTCCGTGGCTTATTGTGGTGTTGTTGTAACAGCCATTTGCTATTGGTTGCAAGTCTGCACTATAGAGACCAAAGGTCCTGTATTCACAGCAATGTTCACCCCTCTAGCCCTTGTGATTACAGCAATATTCTCAGCAATTTGTTGGAAAGAAACACTTTACTTGGGAAGCATTGGTGGCACAATTTTGTTGGTGATTGGACTCTATAGTGTCTTGTGGGGGAAGAACAAGGAGGGTGTAAAAGTGGTAAACCATGAAGTTGGACAAGTAAAAGAGGAAACCAGATTGGAGTGCATTATACAGCACTGA 1065 0.4085 MKRLMAMMEKHKPYIAMLFIQFVYAGMALLSKVAISKGMSPYVFVVYRQTFATLALSPFAFFDSKHAAPLSCNLLCKLFLVSLVGLTASSNLYYVSINYTSATFAAASTNTIPSITFILAALLRVESISIKHLHGVAKILGSVLSLTGAVTFALVKGPPLHFIRENQNHGSHILSMVHSKGDSIKGSIMMLSANATWSLWLILQGFIVKQYPAKFRLTIIQCFFSFIQSAILAVAVERNNPHAWRLGWDIHLLSVAYCGVVVTAICYWLQVCTIETKGPVFTAMFTPLALVITAIFSAICWKETLYLGSIGGTILLVIGLYSVLWGKNKEGVKVVNHEVGQVKEETRLECIIQH* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2758 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 329 - -
Lja2g2758 354 PANTHER WAT1-RELATED PROTEIN 10 331 IPR030184 GO:0016021|GO:0022857
Lja2g2758 354 PANTHER WAT1-RELATED PROTEIN 10 331 - -
Lja2g2758 354 Pfam EamA-like transporter family 185 324 IPR000620 GO:0016020|GO:0016021
Lja2g2758 354 Pfam EamA-like transporter family 12 145 IPR000620 GO:0016020|GO:0016021
Lja2g2758 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2758 Lja-Chr2 41956516 41960707 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2758 12 348 Nodulin-like Gene Family AT5G07050 37.861 2.08e-81 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2758 - - gmx:100800562 573.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2758 2 41956516 41960707 Lja2g2758 2 41956516 41960707 ECH