Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2738 ATGGCTAGTAAGCTGGAAGAGATAGTAGTCCAACTAGAATCTATCTTGAAACTCAAAAAGAGTCTTGATCTCAAAGAGATTGCAATGGAGAACCTGTCATATAAAACTCCATCCACATCTCTCCAAGATAGATCTCATATATATGGCAGGGATAAAGATAAGGAGGCCATCATCAAGTTGTTGTTAAATAATAATAATAATGATGGTGATGAAGTACCCGTGATCCCTATTGTTGGCATCGGTGGGGTTGAAAAGACCACTTTAGCACAGTTGGTGTACAACGATGACAATTTGAAGCATGAATTTGATTTTAAAGCATGGGTTTGTGTTTCTGAACAATTTGATATCATGAGGGTTACAAAGACAATAGTACAAGCAGTTACATGTAAAGCTTGTGAAATGAATGATTTAAACTTACTCCATCTTCAATTGCAAGAGAAATTGAAAGGAAGAAAATTCCTAATTGTTTTGGATGATGTTTGGATCGATGATTATGATAATTGGAATCTTCTAAGAAAACCTTTTCAAAGTGGAATGAGGGGAAGTAAAATTCTTGTAACAACCCGCAATGAAAACGCTGCTTCGGTAGTCCAAACTGTTCAAACTTACCCTCTAAACCATCTATCAAATGAAGATTGTTGGTTGGTATTTGCAAACCATGCATGTATTTCTTTAGGAACTTGTGAGACTACAGAAACTCTAGAGGAAGTTGGCATGAAGATTGTAAAAAGGTTCAAGGGACTGCCTTTAGCAGCACAATCACTTGGAGGTATATTGCGAAGAAAGCGTGATATTAGGGATTGGAATAATATACTGAATAGTCACATTTGGCAATTATCCGAGAGTGATAGTAAGATTATTCCTGCATTGAGAATCAGTTATCATTATCTCCCTCCTCATTTAAAGCGCTGCTTTGTATATTGTTCATTGTTTCCCAAAGATTATGAATTTGAGAAAAAGAATTTAATTTTGTTGTGGATGGCTGATGCACCAAAGAGTGGAAAGTCTTTAGAAGAAGTTGGTTATGAGTGTTTTGATTATTTAGTTTCAAGATCATTTCTTCAACACTCAAGTACTCCACAGAAGGAGTCTTTTATCATGCATGATTTCATGCATGATTTAGCGACTTTCCTTGCTGGAAAATTCTACTCTAGATTAGAAAGTCCTGGAGAAGAAGCAAAGATTCATCTCAAGACTCGACATTTATCATTTACCAAATTTAGTTTTCCAATCTTTAATAACTTTGAAGTTTTTGGCACAGCAAAATTTTTGAGAACATTTTTGGCAATCAATGTTGATATTAAATATGAAGAGGTGCAATGTATCATGCTATCAAAGCTCAAGTTCTTGAGAACATTATCATTTTGCTTCCGAAACATGAACACACCGCCTGATTTTGTAGGCATGTCTTGCCTTTCATGTAGTGTGCAATTATGGTTTCCTGCTGCCAGTGGGTTACACTTACATGGTAGGAGAATGTATCAACTTGTCTGA 1494 0.3574 MASKLEEIVVQLESILKLKKSLDLKEIAMENLSYKTPSTSLQDRSHIYGRDKDKEAIIKLLLNNNNNDGDEVPVIPIVGIGGVEKTTLAQLVYNDDNLKHEFDFKAWVCVSEQFDIMRVTKTIVQAVTCKACEMNDLNLLHLQLQEKLKGRKFLIVLDDVWIDDYDNWNLLRKPFQSGMRGSKILVTTRNENAASVVQTVQTYPLNHLSNEDCWLVFANHACISLGTCETTETLEEVGMKIVKRFKGLPLAAQSLGGILRRKRDIRDWNNILNSHIWQLSESDSKIIPALRISYHYLPPHLKRCFVYCSLFPKDYEFEKKNLILLWMADAPKSGKSLEEVGYECFDYLVSRSFLQHSSTPQKESFIMHDFMHDLATFLAGKFYSRLESPGEEAKIHLKTRHLSFTKFSFPIFNNFEVFGTAKFLRTFLAINVDIKYEEVQCIMLSKLKFLRTLSFCFRNMNTPPDFVGMSCLSCSVQLWFPAASGLHLHGRRMYQLV* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2738 497 PANTHER - 1 455 - -
Lja2g2738 497 Pfam NB-ARC domain 51 294 IPR002182 GO:0043531
Lja2g2738 497 Gene3D - 293 377 IPR036388 -
Lja2g2738 497 PRINTS Disease resistance protein signature 74 89 - -
Lja2g2738 497 PRINTS Disease resistance protein signature 245 259 - -
Lja2g2738 497 PRINTS Disease resistance protein signature 147 161 - -
Lja2g2738 497 PANTHER DISEASE RESISTANCE PROTEIN RP 1 455 IPR044974 GO:0006952
Lja2g2738 497 Gene3D - 207 292 IPR042197 -
Lja2g2738 497 Gene3D - 27 202 IPR027417 -
Lja2g2738 497 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 308 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2738 Lja-Chr2 41296488 41297981 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2738 71 263 WRKY Transcription Factor Family AT5G45050 24.752 1.27e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2738 - - gmx:100777231 606.675