Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2737 ATGGCATCCAACCCTACATCCCTCAACCAAGCCAAACATGTCCTCCCAAACAATGACCTTGAGCAACAAGCAACAACACCTCTAGAAATCGAAACCGAGGACTTTGACTACTCAAAGAGATCTCAGTGGCTTCGCGCAGCTGTCTTGGGAGCCAACGACGGGCTGGTCTCAACAGCATCCCTGATGATGGGCGTGGGAGCGGTCAAGCAAGACATCAAGGCAATGATCTTATCCGGTTTCGCCGGGCTGGTGGCCGGCGCTTGCAGCATGGCCATAGGGGAGTTTGTGTCTGTGTACTCCCAGTTGGAGATAGAAGTTGCTCAAATCAAGAGAGAGAAAGAAAGAGGAAGCGATGGAGGCAGAGAACATCATGATCCTGAAGAGAAAGAAAGTTTGCCAAACCCTTTGCAAGCTGCAGCAGCTTCAGCTTTGGCCTTTAGTGTTGGTGCAATAGTGCCATTGCTTGCAGCCTCTTTTATAAAGGGATATAAGGTGAGGGTTGCAGTGGTTTTGGCTGCAGTGAGTTTTGCTTTGGTGGTGTTTGGTTGGTTAGGGGCAGTTTTGGGTAAGGCTCCAGTGTTGAGGTCTGTTTTGAGGGTCTTAATTGGAGGTTGGTTGGCTATGTGCATTACTTTTGGGCTAACCAAGTTGATTGGGTCAAGTGCACTTTAG 672 0.4926 MASNPTSLNQAKHVLPNNDLEQQATTPLEIETEDFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKAMILSGFAGLVAGACSMAIGEFVSVYSQLEIEVAQIKREKERGSDGGREHHDPEEKESLPNPLQAAAASALAFSVGAIVPLLAASFIKGYKVRVAVVLAAVSFALVVFGWLGAVLGKAPVLRSVLRVLIGGWLAMCITFGLTKLIGSSAL* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2737 223 Pfam VIT family 122 215 IPR008217 GO:0005384|GO:0030026
Lja2g2737 223 Pfam VIT family 44 115 IPR008217 GO:0005384|GO:0030026
Lja2g2737 223 MobiDBLite consensus disorder prediction 112 131 - -
Lja2g2737 223 MobiDBLite consensus disorder prediction 112 132 - -
Lja2g2737 223 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 15 220 - -
Lja2g2737 223 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 15 220 IPR008217 GO:0005384|GO:0030026
Lja2g2737 223 CDD Nodulin-21 42 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2737 Lja-Chr2 41249546 41250500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2737 1 223 Nodulin-like Gene Family AT3G43660 65.919 6.01e-98 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2737 K22736 - pop:7466401 335.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2737 2 41249546 41250500 Lja5g0711 5 6461251 6462388 PCT