Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2734 ATGGACTCAAAGTTCATCGGAAAACCGCCGACAACGGTGGACCTAGAGCGGATGCCGGAGCGTGGCTCCCACCACCGACGCTCTCACTCCGATACTAGTTTCCGTTTCGCCGCCACCTTTGATGACCTCCTCATGTTCGACCCTTCCGACCTCGACATCTCCAACCTCCCTCTCCCGTCGCACTCCGGCGGAGAAACTGGCGGTGGCGGCGGCGGCCCGATGGCGGTGGATTCGGATGAGTCTGGTGGGAGGCCTTCCGCGGCGGCTGGCCCGCACGCCTCGCACCTCCGGAGCTTGTCCGTGGACTCTGACTTCTTTGACAGTATTGGATTCTCCGGCGGTGGGGAGGAGAAAATCAACGGGAAGTGCGGCGGCGAGAGGAGGGTGAGTCACCACCGGCACAGTAATTCGATGGACGGGTCTTCTACGACGTCGTTTGAGGCTGACTCGTTGATGATGTTGGACGGTGTGAAGAAGTCAATGGCACCTGATAAACTCGCTGAGCTTGCTCTTATTGATCCAAAGAGAGCTAAGAGGATTCTTGCTAATAGACAATCTGCTGCGCGATCAAAGGAGAGGAAAACGCGTTATACAAGTGAGCTGGAGAGGAAGGTGCAAACGCTTCAAACTGAAGCAACTAATCTCTCTGCTCAGCTCACCATGCTTCAGAGAGACACCACAGATTTGACCGCCGAGAATAAGGAGCTCAAACTGCGGTTAGAGGCGTTGGAACAAGAAGCTCAGCTTAGAGAAGATCTCAATGAGGCATTGAAGGAAGAACTACAGCGCCTTAGGGCACAAAATAATCGTTTAAGTTCTGTTGGTGGTAATCCTTCTTTCGGTGGGATCTACTCCCATTTGGCTTCCCAGCTAGCCATGCAACAGTTGAATGATCCTCCAACTCAGCAGGGACAGCCTCGCATGCGGGCTTCTTTCAACGGGCATGGCCACCCTAACTTCAGGGACTTTAATCAGAAGTAG 981 0.5413 MDSKFIGKPPTTVDLERMPERGSHHRRSHSDTSFRFAATFDDLLMFDPSDLDISNLPLPSHSGGETGGGGGGPMAVDSDESGGRPSAAAGPHASHLRSLSVDSDFFDSIGFSGGGEEKINGKCGGERRVSHHRHSNSMDGSSTTSFEADSLMMLDGVKKSMAPDKLAELALIDPKRAKRILANRQSAARSKERKTRYTSELERKVQTLQTEATNLSAQLTMLQRDTTDLTAENKELKLRLEALEQEAQLREDLNEALKEELQRLRAQNNRLSSVGGNPSFGGIYSHLASQLAMQQLNDPPTQQGQPRMRASFNGHGHPNFRDFNQK* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2734 326 MobiDBLite consensus disorder prediction 116 144 - -
Lja2g2734 326 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 10 319 - -
Lja2g2734 326 MobiDBLite consensus disorder prediction 14 32 - -
Lja2g2734 326 MobiDBLite consensus disorder prediction 295 309 - -
Lja2g2734 326 Coils Coil 198 274 - -
Lja2g2734 326 MobiDBLite consensus disorder prediction 56 95 - -
Lja2g2734 326 CDD bZIP_plant_RF2 176 225 IPR044759 GO:0003700|GO:0006355
Lja2g2734 326 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 10 319 - -
Lja2g2734 326 SUPERFAMILY Leucine zipper domain 175 227 IPR046347 GO:0003700|GO:0006355
Lja2g2734 326 Pfam bZIP transcription factor 175 233 IPR004827 GO:0003700|GO:0006355
Lja2g2734 326 MobiDBLite consensus disorder prediction 295 326 - -
Lja2g2734 326 MobiDBLite consensus disorder prediction 120 135 - -
Lja2g2734 326 MobiDBLite consensus disorder prediction 1 32 - -
Lja2g2734 326 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 173 236 IPR004827 GO:0003700|GO:0006355
Lja2g2734 326 Gene3D - 174 226 - -
Lja2g2734 326 SMART brlzneu 171 235 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2734 Lja-Chr2 41136564 41141640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2734 9 326 bZIP Transcription Factor Family AT1G43700 47.126 1.04e-78 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lja2g2734 bZIP_1 3.5e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2734 K20557 - gmx:778142 434.876