Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2687 ATGGGGAAAATTAGTTTAGCTAAGACAACACATCTCATGATGACCCTGGTGTTAGTACTAGGATTATTATTGAGCACCTCTGTTGTTACTATTGCAGGAAGCAAACATGTGAGCATCAAGAACAAACTAGGATCTGAGAGGAACATGACCTTACATTGCCAATCCAAAGACAATGATTTGGGCAAGCAGAACATTGAAGATGGGAGTGAATTTGGGTGGGACTTCTCTGATAATATTATTGGAACTACCTTGTTTTTCTGTGATTTGGCATGGGACAGAGTTCAGCAGTATTATATTGATGCTTATTCCTTTGGAAGGGACTTCGTGCGATGTAAGACTGGATGTTCATGGCTTGTAGCAGCTGAAGGAATTTATGGCTTAAATGGACAAACAGGGTTCTGGGAATTCATGTACAATTGGCCAAACTGA 429 0.4033 MGKISLAKTTHLMMTLVLVLGLLLSTSVVTIAGSKHVSIKNKLGSERNMTLHCQSKDNDLGKQNIEDGSEFGWDFSDNIIGTTLFFCDLAWDRVQQYYIDAYSFGRDFVRCKTGCSWLVAAEGIYGLNGQTGFWEFMYNWPN* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2687 142 PANTHER - 22 125 IPR010264 -
Lja2g2687 142 PANTHER PUMILIO HOMOLOG 15-LIKE 22 125 - -
Lja2g2687 142 Pfam Plant self-incompatibility protein S1 36 140 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2687 Lja-Chr2 38131531 38131959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2687 37 140 Carbohydrate Esterase AT3G16970 30.841 2.53e-13 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2687 - - gmx:102670225 197.978