Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2681 ATGTCTCAAACAAAGAAGTGTGGAGGCATGAAGCAGCTATGGATGTTTGTGTTTGTGGGTTTGGTGACTGTGAAATGGGTGGAAGGGTTTGAGAATGCTACTTTGGAAGTGCAATATGTCACTGGAAGAGGTTTCTACAGACCATTGATGGTTGGTCTTACTCTTATTAATGGTGCTGCTGCTAAAGGAGCTGTCTGCCTGGATGGGTCTCTACCGGGTTACCACTTACACCGTGGATATGGATCAGGATCAAACAGTTGGCTCATACAATTGGAGGGCGGAGGCTGGTGTGGAACTATCAGAAATTGTGTTTATAGTAAGAAAACACGTCATGGTTCATCAGCATTTATGGAAAAATATATACCATTTATTGGGATACTAAGCAACAAGGCTGAGGAAAATCCAGATTTTTGCAATTGGAATAGAGTGAAAATTCGTTATTGTGATGGTGCATCATTTAGTGGGGACAGTCAAAATGAGGCAGCAGGGTTGTATTTCAGAGGGCAACGCATCTGGCAAGCTGCTATGGAAGATTTAAAGTCAAAAGGGATGCGCTATGCTAAACAGGCTCTTCTATCTGGATGTTCTGCTGGAGGTTTATCATCTATACTACACTGTGATGAATTTAGCGAGTTGTTTCCTAGAACCACAAGAGTGAAGTGCTTAAGTGATGCTGGATTATTCCTTGATTCTGTTGACGTATCTGGCCATCGCAATTTAAGGAATATGTTCAGAGCTGTGGTCACCTTACATGGAGTGCAAAGGAACCTTCCAAGGAGTTGTACCAGTCACCTCAATCCAATTCTGTGCTTTTTCCCTCAGCACTTAATTGCCAGTGTAAGGACACCACTATTTCTTCTGAATGCAGCTTATGATTCTTGGCAGGTTCAAGAGAGTGTCGCTCCACCATCTGCTGACTATCACTGGAATTGGATGGAATGCAGAAAAAATTATGCACGTTGCAGTTCACCACAGATACAGTATCTCCAAGGTTTCCGTAGTCAAATGCTTAGAGTTACAAGAGGCTTCTCAAGGGCTCGTAAAAATGGGTTGTTCATAAATTCATGTTTCTCGCATTGCCAATCTGAAAGACAAGATACATGGTTTGCACGCAATTCTCCTCGTATTGGAAATAAAGGGATTGCAGAGTCTGTTGGGAATTGGTTTTTTGACAGAAGTAGTGTCCAGGCTATCGGTTGTGCTTACCCTTGTGACAAGACTTGCCATAATTTGGTTTTCAAGTGA 1245 0.4241 MSQTKKCGGMKQLWMFVFVGLVTVKWVEGFENATLEVQYVTGRGFYRPLMVGLTLINGAAAKGAVCLDGSLPGYHLHRGYGSGSNSWLIQLEGGGWCGTIRNCVYSKKTRHGSSAFMEKYIPFIGILSNKAEENPDFCNWNRVKIRYCDGASFSGDSQNEAAGLYFRGQRIWQAAMEDLKSKGMRYAKQALLSGCSAGGLSSILHCDEFSELFPRTTRVKCLSDAGLFLDSVDVSGHRNLRNMFRAVVTLHGVQRNLPRSCTSHLNPILCFFPQHLIASVRTPLFLLNAAYDSWQVQESVAPPSADYHWNWMECRKNYARCSSPQIQYLQGFRSQMLRVTRGFSRARKNGLFINSCFSHCQSERQDTWFARNSPRIGNKGIAESVGNWFFDRSSVQAIGCAYPCDKTCHNLVFK* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2681 414 Pfam Pectinacetylesterase 49 394 IPR004963 GO:0016787
Lja2g2681 414 PANTHER NOTUM-RELATED 16 413 IPR004963 GO:0016787
Lja2g2681 414 PANTHER PECTIN ACETYLESTERASE 16 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2681 Lja-Chr2 38015245 38047988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2681 2 414 Carbohydrate Esterase AT1G57590 62.884 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2681 K19882 - gmx:100791571 746.503