Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2665 ATGGCGGCAGGACTCTCCGCCACCATAACCGTGAAGCCCCTCTTCCGCCGCCACCATCAACCACCGTCGTTCCCCCTCCTCCTCAACCCACCTCCAGCACTCTCCTTCTCCTCCTCCCCCTTGCGATGTTTCCATCACAGCTCAACCCCTCGCACCCGAAGAATGACTACGAGCTTCACCGTCTGTGTCCTCATGGAGGATCCAAAACGCAGCACCCCCATGGAAACCGATGCGGTAGAACAAGGACAAGAACAAAGACCTTCTCCTACTCAAGTCGTGTCTGCGAAATTGGCGGAGAAATTGGCTAGGAAGAAATCAGAGAGGTTCACGTATCTCGTTGCAGCTGTGATGTCTAGCTTTGGAATCACATCCATGGCGGTTTTGGCTGTTTATTATAGATTCTCATGGCAAATGGAGGGTGGAGAAGTTTCTTGGTCTGAAATGTTTGGTACATTTGCTCTATCAGTGGGTGCTGCTGTGGGTATGGAGTTTTGGGCTAGATGGGCTCACAAGGCTCTTTGGCATGCTTCCTTGTGGCACATGCATGAGTCCCACCATAAACCAAGAGAAGGACCCTTCGAGATGAACGATGTTTTTGCAATAATCAATGCTGTCCCTGCCATCGCTCTCCTATCCTATGGTTTCTTTCACAAAGGACTAGTCCCTGGCCTCTGCTTCGGTGCGGGTCTTGGAATTACTGTCTTTGGGATGGCCTACATGTTTGTTCATGATGGTTTGGTTCATAGGAGATTCCCAGTGGGCCCCATTGCCGATGTGCCCTACTTCAGAAGGGTAGCTGCTGCTCACAAACTTCACCATTCAGACAAGTTCAGTGGGGTGCCATATGGGCTGTTTTTGGGACCAAAGGAACTTGAAGAGGTGGGAGGTCTAGAAGAGCTGGAGAAAGAGATAAATAGGAGGATAAGATCATACAATAATAGTTCATGA 948 0.5 MAAGLSATITVKPLFRRHHQPPSFPLLLNPPPALSFSSSPLRCFHHSSTPRTRRMTTSFTVCVLMEDPKRSTPMETDAVEQGQEQRPSPTQVVSAKLAEKLARKKSERFTYLVAAVMSSFGITSMAVLAVYYRFSWQMEGGEVSWSEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHKPREGPFEMNDVFAIINAVPAIALLSYGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHRRFPVGPIADVPYFRRVAAAHKLHHSDKFSGVPYGLFLGPKELEEVGGLEELEKEINRRIRSYNNSS* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2665 315 MobiDBLite consensus disorder prediction 76 92 - -
Lja2g2665 315 MobiDBLite consensus disorder prediction 71 92 - -
Lja2g2665 315 Pfam Fatty acid hydroxylase 158 285 IPR006694 GO:0005506|GO:0008610|GO:0016491
Lja2g2665 315 PANTHER BETA-CAROTENE HYDROXYLASE 2 311 - -
Lja2g2665 315 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 2 311 IPR045019 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2665 Lja-Chr2 37473136 37476388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2665 1 228 Chloroplast and Mitochondria Gene Families AT4G25700 62.445 3.62e-94 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2665 K15746 - gmx:100785541 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2665 2 37473136 37476388 Lja5g0666 5 6004049 6006770 ECH
Lja2g2665 2 37473136 37476388 Lja2g2665 2 37473136 37476388 ECH
Lja2g2665 2 37473136 37476388 Lja5g0666 5 6004049 6006770 PCT