Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2655 ATGGACACCCAAAAGCTAATTCTCCTTCTCATTCTCCTCCTTTTCACTCCTTGCTCATTCTCTTCTTTCACTCCCACAGACAACTACCTCCTCAGCTGTGGATCACAGACCAATGCTTCCCTCTTCAACCAGTTCTTCATGGGTGATTCCACCAACCAAGGTTCAGTTTTTCTCTCTGCAGACAAATCCATTTCCCTCACCAACCAAAACCCACCTCCAAATTCACCCACTTTGTATCACACTGCCAGAGTTTTCACCACCACAGGGAGCTACAGATTCAGCATGAGGAAAAACGGTACCAACTTTGTTCGTTTTCATTTCTCAACGTTTAAGGCTCCAGGTTTTGAATTTGATCTAAAATCTGCAAACTTTAGTGTCTTGGTTGATGGGAATTTGGTTCTGAGCAATTTCAAGCCAAATAATGGTAGTATACTGATTAAAGAGTTTGTTTTGAAGGTAGAGTCAAATTTGCTTGAAATTGTGTTTAGACCTGCTGGTAACTCTGGTTTTGGCTTTGTCAATGCTGTAGAGGTGTTTTCTGCTCCAGAAGATTTTATTATAGATTATGGAGCTAGGTTGGTTGGCCCTTCTGATGTGCAAGAATATAAGAACCTTTCATCCCAGGTTTTAGAAACTGTCCATAGGATTAATGTTGGAGGTGTGAAATTAACTCCTTTTAATGATACCCTTTGGAGGACTTGGATTCCTGATGAGGATTACCTTGTTTTAAAGGATGCTGCTAAGCGTGTAGTGAGCACTCACACACCAAATTACCAGACGGGAGGTGCGAATAGAGAGATCGCGCCGGATAATGTTTATATGACAGCCCGGGAGATGGATAGGGATAACTCCATTATAGCTTCACAGTTCAACATAACCTGGAATTTTCCAGTTGTTCCTGGCGGTGTTCGGCACTTGGTTCGGTTGCATTTCTGTGATATTGTTAGTCCTGCCCTTAATTTGCTCTACTTTGATGTGTATATCAACGGGTATTCTGCATATAAGGATCTTGATTTGTCATCCCTCACATTCCACACGCTTGCATCTCCAGTCTATGTGGATTTTGTTGCAGATTCTGATGATTCGGGCGTTATGCAAATAAGTGTTGGTCCTTCTGATCTGAGCAGTTATGTCAGGATGAATGCAATACTGAATGGTGCTGAAATAATGCAGCTGGTGAATGCTGTAGATTCCAGTGTTGTTTCTCAGAAGAAAAGGTTGTGGGTGCTGGTGGTGGTGGGTTCAATTGTTGGAGGAATTGTTGTTTTACTTTTAATTTTGGCTGCTTTTCTAGCTTCCTTCAGGAAGAAGAAACCGAAACAATTGACAGTTGAAAGTGTAGGATGGACACCTTTACGCCTGTTTGGAGGGAGTTCACTTAGTAGAATGTCTGAAGTTACAGGCTTTCCATCTCCTGGTTATTTTGGCTTGAAAATCCCTTTTGCTGATATACAAGCAGCAACAAACAATTTTGATAGAACTCTTATTATAGGGTCTGGTGGGTTTGGTATGGTTTACAAAGGGGTGTTCAAGGACAACATGAAGATTGCAGTCAAGAGAGGCATGCCTGGATCTAGACAAGGCCTACCAGAATTCCAGTCTGAAATAACAATTTTATCTAGAATTCGCCATCACCACCTTGTTTCATTGGTTGGCTATTGTGAAGAAAATTCAGAAATGATACTTGTCTATGAGTATGTGGAAAAAGGACCACTTAAAAAGCATCTGTATGGTGCAGCAGTACTTCAACCTTTGTCTTGGAAGCAGCGTCTCGAGATATGCATCGGCGCGGCTAGAGGTCTCCACTATCTTCACACTGGTTTCGCGCAAGGGATCATCCACCGTGACATTAAATCAACCAACATTTTGCTTGATGAAAACAATGTGGCAAAGGTTGCTGATTTTGGTCTTTCAAGATCTGGACCTTGTGTGAATGAAACTCATGTGAGTACTGGTGTGAAAGGTAGTTTCGGTTACCTTGATCCGGAGTATTTTCGTAGGCAGAAGCTTACAGATAAATCAGATGTTTACTCATTTGGGGTTGTGCTTTTTGAGGTTCTCTGTGCTAGACCTGCTGTTGATCCACAGCTTGATAGGGAACAGGTGAACTTAGCAGAATGGGCCCTTGAGTGGCAGAAGAAAGGCATGTTGGAGCATATTATCGATCCGTATCTTGTCGGAAAGATCAAGCAAAGCTCCTTGAAGAAATTCGGTGAAACAGCAGAGAAATGTTTGGCTGAATATGGTGTTGACAGACCAACTATGGGTGATGTGCTATGGAATTTGGAATATTCACTTCAGCTCCAAGAAAATGAACACGAAAGGGAGCCATGTGCTGATAGAAGTTCTCATGGAGAAGTGAATGTGACCACTACAATAAATCCTGGGAATTCTTCTAGCAACATGAGAACACAGGGACATTGTGATAATAATTATCAAGATGTAGGTGGTACCCAAGTTTTTTCCCAACTAATGACCAAAGAAGGAAGATAG 2493 0.4188 MDTQKLILLLILLLFTPCSFSSFTPTDNYLLSCGSQTNASLFNQFFMGDSTNQGSVFLSADKSISLTNQNPPPNSPTLYHTARVFTTTGSYRFSMRKNGTNFVRFHFSTFKAPGFEFDLKSANFSVLVDGNLVLSNFKPNNGSILIKEFVLKVESNLLEIVFRPAGNSGFGFVNAVEVFSAPEDFIIDYGARLVGPSDVQEYKNLSSQVLETVHRINVGGVKLTPFNDTLWRTWIPDEDYLVLKDAAKRVVSTHTPNYQTGGANREIAPDNVYMTAREMDRDNSIIASQFNITWNFPVVPGGVRHLVRLHFCDIVSPALNLLYFDVYINGYSAYKDLDLSSLTFHTLASPVYVDFVADSDDSGVMQISVGPSDLSSYVRMNAILNGAEIMQLVNAVDSSVVSQKKRLWVLVVVGSIVGGIVVLLLILAAFLASFRKKKPKQLTVESVGWTPLRLFGGSSLSRMSEVTGFPSPGYFGLKIPFADIQAATNNFDRTLIIGSGGFGMVYKGVFKDNMKIAVKRGMPGSRQGLPEFQSEITILSRIRHHHLVSLVGYCEENSEMILVYEYVEKGPLKKHLYGAAVLQPLSWKQRLEICIGAARGLHYLHTGFAQGIIHRDIKSTNILLDENNVAKVADFGLSRSGPCVNETHVSTGVKGSFGYLDPEYFRRQKLTDKSDVYSFGVVLFEVLCARPAVDPQLDREQVNLAEWALEWQKKGMLEHIIDPYLVGKIKQSSLKKFGETAEKCLAEYGVDRPTMGDVLWNLEYSLQLQENEHEREPCADRSSHGEVNVTTTINPGNSSSNMRTQGHCDNNYQDVGGTQVFSQLMTKEGR* 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2655 830 Gene3D Transferase(Phosphotransferase) domain 1 567 787 - -
Lja2g2655 830 CDD STKc_IRAK 497 763 - -
Lja2g2655 830 Pfam Malectin-like domain 31 391 IPR024788 -
Lja2g2655 830 Pfam Protein tyrosine and serine/threonine kinase 496 758 IPR001245 GO:0004672|GO:0006468
Lja2g2655 830 ProSiteProfiles Protein kinase domain profile. 491 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g2655 830 Gene3D Phosphorylase Kinase; domain 1 461 566 - -
Lja2g2655 830 ProSitePatterns Protein kinases ATP-binding region signature. 497 519 IPR017441 GO:0005524
Lja2g2655 830 MobiDBLite consensus disorder prediction 784 800 - -
Lja2g2655 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 612 624 IPR008271 GO:0004672|GO:0006468
Lja2g2655 830 MobiDBLite consensus disorder prediction 773 800 - -
Lja2g2655 830 SUPERFAMILY Protein kinase-like (PK-like) 476 760 IPR011009 -
Lja2g2655 830 Gene3D - 209 395 - -
Lja2g2655 830 Gene3D - 28 183 - -
Lja2g2655 830 SMART serkin_6 491 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g2655 830 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 16 790 - -
Lja2g2655 830 PANTHER OS07G0166700 PROTEIN 16 790 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2655 Lja-Chr2 37147233 37150416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2655 9 830 Receptor kinase-like Gene Family AT5G59700 47.867 0.0 709
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lja2g2655 Malectin_like 1.2e-30 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2655 - - gmx:100814974 1330.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2655 2 37147233 37150416 Lja2g2655 2 37147233 37150416 ECH
Lja2g2655 2 37147233 37150416 Lja5g0664 5 5994187 5997408 PCT