Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2640 ATGCCTTCATGGTGGGGGAAACCATCGTCAAAAGAAACCAAGAAGAAGGCAAGTAAGGAAAGTTTTATTGACACACTACAACGAAAATTTAAAAGCCCATCCGAAGGTAAACTAAGCAGTAGATCTGGAGGATCCGGTAGACGTTGCAATGACACAATTTCAGAAAAGGGGGCTCAGTCTCCTCCTGAATCGAGATCTCCTTCACCTTCCAAAGTTGCAAGGTGTCAAAGTTTTGCTGAAAGGCCTCGTGCTCAACCATTGCCTCTTCCTGGCCTGCATCCATCTAATATAAGCCGAGCAGATTCTGAAATTAGCATATCATCTAAAATAAGACAGGAAAAGAGCTCCAAACAATCACTGTTTCCGCCGTTACCAAGACCTGCATGCATGCGTGGTCGACTAAACCCTGGAGATTTGGATAGTGATTTGATCACTGCTTCAGTCTCTAGTGAGAGCTCTGCTGATAGTGATGAACCATTGGACTCCCGCAATCGCAGTCCTCTGGCGACTGACTCCGAGACTGGGACTAGAACTGCTGCAGGCAGTCCTTCAAGCCTAATGCTCAAGGATCAATCAGCTGCTGTTGCCCAAGTAAATTCAAGGGAAGCCAAAAAGCCGGCAAACATTCTGGGTAATATGTCTTCTACTTCACCAAAACGGAGGCCTTTAAGCAACCATGTTCCAAATCTGCAGATTCCTCCTCATGGTGCCTTTTGTAGCGCTCCTGACAGTTCCAGGTCAAGTCCATCAAGAAGTCCGTTGAGAGCATTTGGCACCGAACAAGTATTGAACTCTGCGTTTTGGGCTGGAAAGCCATATACAGAGGTCAATTTTGTTGGGTCTGGGCAGTGCTCAAGTCCAGGTTCTGGACACAATTCTGGGCACAATTCAATGGGAGGGGACATGTCAGGACAGTTATTTTGGCAACCAAGCAGGGGTAGCCCTGAATATTCTCCTGTACCTAGTCCCAGAATGACTAGCCCTGGTCCAAGCTCTAGAATTCAGAGTGGAGCTGTTACACCTATTCATCCCAGAGCTGGGGTAACATCTGCTGAATCACAAATAGGACGGGTTGATGATGGGAAAAAACAGAGCCACCGTTTGCCCCTTCCTCCTTTAGCTGTTACCAATTCCATGCCTTTCTCTCATTCAAATTCTGCAGCAACATCTCCATCCATGCCGAGAAGTCCAGGAAGAGCAGATAATCCAATGAGCCCTGGTTCACGTTGGAAAAAAGGAAAGCTACTTGGCAGAGGCACATTTGGGCATGTCTATGTTGGCTTCAATAAGGAAAGTGGTGAAATGTGTGCAATGAAAGAGGTGACTCTGTTTTCTGATGATGCCAAGTCTAAGGAAAGTGCTAAGCAATTAATGCAGGAAATTTCCTTATTAAGCCGTTTACAGCATCCGAATATTGTGCAGTATTACGGTTCTGAAACAGTAGATGACAAGCTTTACATATACCTGGAGTATGTAGCTGGAGGTTCCATATATAAACTTCTTCAAGAATATGGGCAGTTTGGTGAGCTAGCTATTCGTAGTTATACTCAACAAATTTTGTCAGGGCTTGCTTATTTGCATGCTAAAAACACTATCCACAGGGACATCAAAGGAGCAAATTTACTAGTAGATACTAATGGGCGGGTCAAGTTGGCAGACTTTGGCATGGCCAAACATATAACAGGGCAATCATGTCCATTATCATTCAAAGGAAGCCCTTATTGGATGGCACCTGAGGTTATAAAAAACTCTAGTGGGTGCAATCTTGCGGTAGATATATGGAGTCTTGGATGCACTGTTTTGGAAATGGCTACAACTAAGCCTCCTTGGAGTCAATATGAAGGGGTTGCTGCCATGTTCAAGATTGGTAATAGCAAGGAACTCCCAACAATACCAGATCATCTCTCTAATGAAGGAAAGGATTTTGTTCGGAAGTGCCTACAACGTAATCCTCAACAGCGTCCTTCAGCTAGTGATTTGTTGAATCACCCTTTTGTAAAATGTGCTGCACCTTTAGAAAGACCTATTCTCCTTCCTGAAGCTTCAGACCCCGTATCTGAGATTGCACATGGATCAAAAGCTCTGGGCATTGGACAAGGACGGAATCTTTCTATGTTGGATTCAGATAGACTTTCTCTTCATTCTAGGTTTTTGAAAAATAATCCTCATGCAAGTGAGCTCCATATTCCAAGGAATATATCCTGCCCTGTCTCTCCCATAGGAAGCCCACTTTTGAGACCAAGATCACCACAGCATATGAGCGGAAGAATGTCTCCGTCTCCTATATCTAGCCCTCGGACTGCTTCTGGTGCATCCACACCTCTCAGTGGTGGTAGTGGTGCCATTCCATTTAGTAATAACTTAGTTTACTTTCAAGAGGGTCTTGGAAGCTTGCCAAAGTCCCCAAACGGCATCTACATTAGTGGTCCTGCTCATCCTGACTCAAATGTTGACATTTTCCGAGGAATGCAGAAGACTTCTCACATTTCATCGGAACTGGTTCCCAGTGAAAATGATGCTCTGGGCAAGCAGTTTACCAGGCTTCCTCAAGACAAGTCATATGATGTTCAATCAGTCTTGGCTGATCGTGTTTGCCGGCAGCTGCTCGGGGATAATGTGAAGATTAACCCATCTATTGATCTAAGACCCAACACCAATCTGCTCAGCCGAGCAAATGGTTTATGA 2685 0.448 MPSWWGKPSSKETKKKASKESFIDTLQRKFKSPSEGKLSSRSGGSGRRCNDTISEKGAQSPPESRSPSPSKVARCQSFAERPRAQPLPLPGLHPSNISRADSEISISSKIRQEKSSKQSLFPPLPRPACMRGRLNPGDLDSDLITASVSSESSADSDEPLDSRNRSPLATDSETGTRTAAGSPSSLMLKDQSAAVAQVNSREAKKPANILGNMSSTSPKRRPLSNHVPNLQIPPHGAFCSAPDSSRSSPSRSPLRAFGTEQVLNSAFWAGKPYTEVNFVGSGQCSSPGSGHNSGHNSMGGDMSGQLFWQPSRGSPEYSPVPSPRMTSPGPSSRIQSGAVTPIHPRAGVTSAESQIGRVDDGKKQSHRLPLPPLAVTNSMPFSHSNSAATSPSMPRSPGRADNPMSPGSRWKKGKLLGRGTFGHVYVGFNKESGEMCAMKEVTLFSDDAKSKESAKQLMQEISLLSRLQHPNIVQYYGSETVDDKLYIYLEYVAGGSIYKLLQEYGQFGELAIRSYTQQILSGLAYLHAKNTIHRDIKGANLLVDTNGRVKLADFGMAKHITGQSCPLSFKGSPYWMAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDHLSNEGKDFVRKCLQRNPQQRPSASDLLNHPFVKCAAPLERPILLPEASDPVSEIAHGSKALGIGQGRNLSMLDSDRLSLHSRFLKNNPHASELHIPRNISCPVSPIGSPLLRPRSPQHMSGRMSPSPISSPRTASGASTPLSGGSGAIPFSNNLVYFQEGLGSLPKSPNGIYISGPAHPDSNVDIFRGMQKTSHISSELVPSENDALGKQFTRLPQDKSYDVQSVLADRVCRQLLGDNVKINPSIDLRPNTNLLSRANGL* 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2640 894 SUPERFAMILY Protein kinase-like (PK-like) 408 753 IPR011009 -
Lja2g2640 894 MobiDBLite consensus disorder prediction 284 412 - -
Lja2g2640 894 MobiDBLite consensus disorder prediction 1 228 - -
Lja2g2640 894 MobiDBLite consensus disorder prediction 165 198 - -
Lja2g2640 894 CDD STKc_MEKK1_plant 409 666 - -
Lja2g2640 894 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 810 - -
Lja2g2640 894 ProSiteProfiles Protein kinase domain profile. 410 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g2640 894 MobiDBLite consensus disorder prediction 36 73 - -
Lja2g2640 894 MobiDBLite consensus disorder prediction 738 776 - -
Lja2g2640 894 MobiDBLite consensus disorder prediction 98 119 - -
Lja2g2640 894 Pfam Protein kinase domain 411 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g2640 894 MobiDBLite consensus disorder prediction 284 312 - -
Lja2g2640 894 Gene3D Transferase(Phosphotransferase) domain 1 408 684 - -
Lja2g2640 894 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 810 - -
Lja2g2640 894 MobiDBLite consensus disorder prediction 753 776 - -
Lja2g2640 894 ProSitePatterns Protein kinases ATP-binding region signature. 416 439 IPR017441 GO:0005524
Lja2g2640 894 MobiDBLite consensus disorder prediction 9 35 - -
Lja2g2640 894 SMART serkin_6 410 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g2640 894 MobiDBLite consensus disorder prediction 209 224 - -
Lja2g2640 894 MobiDBLite consensus disorder prediction 377 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2640 Lja-Chr2 36636862 36645378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2640 4 883 MAP Kinase Kinase Kinase AT1G63700 58.810 0.0 884
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lja2g2640 Pkinase 2.9e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2640 K20717 - gmx:100792783 1530.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2640 2 36636862 36645378 Lja5g0651 5 5840671 5848268 ECH
Lja2g2640 2 36636862 36645378 Lja2g2640 2 36636862 36645378 ECH
Lja2g2640 2 36636862 36645378 Lja5g0651 5 5840671 5848268 PCT