Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2620 ATGGAGATTTGGGTGCTACCTGTGGCAACATTAGCTCTGTTTTTGCTCTTGAAATTAATGTTTTGTTGGTGGATTTCACCTATCCAAACACATCATAAGCTGAAAAGATGTGGGTTTGGAGGGCCACCCCCAAGTTTTCCACTTGGAAACATTCAAGAGATGAAAAATAAGAATAGCTTTAAATCTTCAGTACTCGAGTCCTCCAAACTCACCCATGATATTCACTCCATTGCGTTCCCCTATTTCTCTCGGTGGCAAAATTCTCACGGGAAGGTCTTTGTGTACTGGCTGGGCACAGAACCATTTTTGTACATTGCAGACCCTGAATTCTTGAAGAAATTGAACACAAAGGTTTTGGCCAAGACATGGGGAAAACCTAGTGTGTTCAGAAATGACAGATTCCCCGTGTTTGGAAATGGTTTGGTTATGGCTGAAGGCAACGAATGGGTTCATCACCGCCATGTTATAGCCCCAGCATTTTCCCCTATTAACTTGAAGGTAATGGCAAGCAAAATGGTGGAGTCCACAAATAAAATGATAGATAGATGGATTGCCCAAATTAACACCGGCAACCCTGAAATTGATGTGGAGAGGGAGATTATAGCAACAGCAGGAGAGATCATAGCAAGGACAAGCTTTGGCATGAAGGACGAAAATGCAATTAAAGTGTCTGAAAATTTCCGTGCCCTGCAAATGACACTTTTCAAGACAACAAGATATGTAGGGGTTCCCTTTGGCAAGTGTTTCGACATGAGGAAAACTTTAGAGGCCAAGAAACTCGGGAAGGAGATCGATCGGCTCTTGATGTGCGTCGTAACGGCTCGAAAGAAATTATCGGTTGAGGGTCGAGATCGAGAAGACTTATTGGAATTATTGTTGCAAGAAAATCATCGAGCTGAGAAGAAGTTAGGGAAGACATTGAGCACGCGGCAATTGGTTGATGAGTGCAAGACCTTCTTCTTTGCGGGTAATGAGACCACAGCATTGGCTATCTCGTGGACTTTGTTTCTTCTAGCTGTGCATGAAGATTGGCAAATCCAGTTACGAGAGGAGATAAAAGAAGTGGTAGGTGATAAAGAAATTGACATTAACGTGCTTGCTGGACTTAAAAAGATGAAATTGGTGATGAATGAAGTTATGAGGCTCTATCCATCAGCACCGAATGTGCAAAGGCAAGCTAGAGAAGACATCCATGTTGATAATTTAACAGTTCCTAATGGAACAAATCTGTGGATCGACGTTGTCGCGATGCACCATGACCCGAAACTGTGGGGAGAAGATGTGAATGAGTTTAGACCTGAGAGGTTCATGGATGATGTCAATGGTGGATGCAAGCACAAGATGGGGTACTTGCCTTTTGGGTTTGGAGGGAGGATGTGTATTGGTAGGAACTTGAGCTTGATGGAGTATAAGATAGTGTTAACTCTTCTCCTCTCTAGATTTAGCTTCAAACTTTCCTCTAGTTATGTCCATTCACCTTCTATCATGCTCTCCCTTAGGCCCACTTGTGGTCTCCCTCTAATAGTTCAACCACTTTAA 1539 0.4295 MEIWVLPVATLALFLLLKLMFCWWISPIQTHHKLKRCGFGGPPPSFPLGNIQEMKNKNSFKSSVLESSKLTHDIHSIAFPYFSRWQNSHGKVFVYWLGTEPFLYIADPEFLKKLNTKVLAKTWGKPSVFRNDRFPVFGNGLVMAEGNEWVHHRHVIAPAFSPINLKVMASKMVESTNKMIDRWIAQINTGNPEIDVEREIIATAGEIIARTSFGMKDENAIKVSENFRALQMTLFKTTRYVGVPFGKCFDMRKTLEAKKLGKEIDRLLMCVVTARKKLSVEGRDREDLLELLLQENHRAEKKLGKTLSTRQLVDECKTFFFAGNETTALAISWTLFLLAVHEDWQIQLREEIKEVVGDKEIDINVLAGLKKMKLVMNEVMRLYPSAPNVQRQAREDIHVDNLTVPNGTNLWIDVVAMHHDPKLWGEDVNEFRPERFMDDVNGGCKHKMGYLPFGFGGRMCIGRNLSLMEYKIVLTLLLSRFSFKLSSSYVHSPSIMLSLRPTCGLPLIVQPL* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2620 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Lja2g2620 512 PANTHER CYTOCHROME P450 FAMILY 72 PROTEIN 3 507 - -
Lja2g2620 512 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2620 512 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2620 512 PRINTS E-class P450 group I signature 86 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2620 512 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2620 512 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2620 512 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2620 512 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2620 512 Pfam Cytochrome P450 79 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2620 512 SUPERFAMILY Cytochrome P450 75 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2620 512 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2620 512 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2620 512 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2620 512 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2620 512 Gene3D Cytochrome P450 24 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2620 512 PANTHER CYTOCHROME P450 FAMILY MEMBER 3 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2620 Lja-Chr2 35961934 35968371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2620 14 512 Cytochrome P450 AT5G52400 59.325 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2620 - - gmx:100784128 803.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2620 2 35961934 35968371 Lja2g2620 2 35961934 35968371 ECH