Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2619 ATGGAAACCCCAATAACCCTCACAGGGTTGCTCCGCAGCGCCGCCGAACGATTCCCCTCCCGACGAGCCCTCTCCGTCGCCGGAAAGTTAGACCTCACCCACTCCGACCTCGACAAACTCGTCGAACTCGCCGCCGCTCGGTTGGTCTCCGCCGGGATCAACCCCGGTGACGTCGTCGCTCTCACCTTCCCCAACACCGTCGAGTTTGTTATAATGTTTTTAGCCGTTATCCGAGCGCGAGCCACGGCGGCACCATTAAACGCGGCTTACACATCGGAAGAGTTCGAGTTTTATTTATCCGACTCCGAATCGAAGATTCTGTTAACGCCGGTAGAAGGAAACAAACCTGCTGAAGCCGCAGCTTCCAAGCTCAACATTCCTCTCGGCTCGGCTTCGCTTACCCAAGCCGAAGGTGAAGAAAAAGTCAAGTTAACCGTCTCTCTGAACCGCACCGAGTCAGAACCCGACTCTGTCAACTCGGTCGCCGGACTCAGTAACGAGCCGTCGGACATAGCGCTATTCCTCCACACCTCCGGCACCACGAGCCGCCCCAAGGGAGTCCCGCTGAGTCAGCACAACCTGGCTTCCTCAGTACGCAACATTCAGTCCGTGTACCGACTCACTGAGTCCGACTCGACGGTGATCGTTCTCCCGCTGTTCCACGTCCACGGCCTAATCGCCGGGTTGCTGAGTTCACTCGGCGTCGGCGCGGCGGTGACGCTCCCGGCGGCGGGGAGATTCTCGGCGTCGACGTTCTGGAAGGACATGGTGAAGTATAACGCCACATGGTACACCGCGGTTCCTACGGTACACCAGATCATACTGGATCGCCACCTGAATAACCCGGAACCGGTTTACCCGAAGCTCCGGTTTATTCGAAGCTGCAGCGCGTCGCTCGCACCGGTGATCATGGGTCGGTTAGAGGAGGCGTTCGATGCTCCGGTTTTGGAGGCGTATGCGATGACGGAGGCGTCTCATCTCATGTGTTCGAACCCGTTGCCGCAGGATGGGCCCCACAAGCCCGGGTCGGTGGGGAAGCCCGTGGGTCAGGAGATGGCGATATTGAATGAAACGGGTCGGGTCATGGAGGCTGAGGCTAATGGAGAGGTTTGTATTAGGGGGCCTAATGTGACGAAAGGGTATAAGAATAACCCGGATGCTAATACGGCGGCGTTTTTGTTTGGTTGGTTTCATACGGGTGATATTGGGTTCTTTGATTCTGATGGGTACTTGCATCTCGTGGGTCGGATCAAGGAGCTCATAAATAGAGGAGGAGAGAAAATATCCCCAATAGAAGTGGATGCTGTCCTCCTATCCCATCCAGAGATAGCCCAGGCAGTTGCTTTCGGAGTGCCAGATGAGAAGTATGGCGAAGAGATACATTGCGCAATCATCCCAAGAGAAGGATCAAACATTGATGAGGCAGAGGTTTTAAGATTTAGCAAGAAGAATCTTGCATCTTTCAAGGTCCCCAAAAAGGTCTTCATTACCGATTCTTTGCCCAAGACCGCCACTGGCAAGATTTTGCGCCGTCTCGTGGCAGAACACTATGTTTCCCAAATTTGA 1566 0.5492 METPITLTGLLRSAAERFPSRRALSVAGKLDLTHSDLDKLVELAAARLVSAGINPGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTSEEFEFYLSDSESKILLTPVEGNKPAEAAASKLNIPLGSASLTQAEGEEKVKLTVSLNRTESEPDSVNSVAGLSNEPSDIALFLHTSGTTSRPKGVPLSQHNLASSVRNIQSVYRLTESDSTVIVLPLFHVHGLIAGLLSSLGVGAAVTLPAAGRFSASTFWKDMVKYNATWYTAVPTVHQIILDRHLNNPEPVYPKLRFIRSCSASLAPVIMGRLEEAFDAPVLEAYAMTEASHLMCSNPLPQDGPHKPGSVGKPVGQEMAILNETGRVMEAEANGEVCIRGPNVTKGYKNNPDANTAAFLFGWFHTGDIGFFDSDGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPEIAQAVAFGVPDEKYGEEIHCAIIPREGSNIDEAEVLRFSKKNLASFKVPKKVFITDSLPKTATGKILRRLVAEHYVSQI* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2619 521 PANTHER ACYL-COA SYNTHETASE 1 521 - -
Lja2g2619 521 SUPERFAMILY Acetyl-CoA synthetase-like 4 519 - -
Lja2g2619 521 CDD FACL_fum10p_like 19 515 IPR045310 GO:0016874
Lja2g2619 521 Gene3D - 5 416 IPR042099 -
Lja2g2619 521 Gene3D - 417 519 IPR045851 -
Lja2g2619 521 PANTHER OXALATE--COA LIGASE-LIKE 1 521 - -
Lja2g2619 521 Pfam AMP-binding enzyme 12 423 IPR000873 -
Lja2g2619 521 Pfam AMP-binding enzyme C-terminal domain 432 507 IPR025110 -
Lja2g2619 521 ProSitePatterns Putative AMP-binding domain signature. 174 185 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2619 Lja-Chr2 35772709 35777191 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2619 6 521 Monolignol Biosynthesis Gene Families AT4G05160 31.707 1.46e-57 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2619 K22133 - gmx:100779306 858.596
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2619 2 35772709 35777191 Lja2g2619 2 35772709 35777191 ECH