Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2535 ATGGCTGTTGCCAAGAGCAGCAGCTGCATTGAACCTTGTACCTCATACAACTGTTACAAAGTAGCAGGCCTGACTGAAACCATATTAGATGCAAATTATACATCTAATTTGAAAGATCGATACATTCTCGGGGAGCAGTTGGGTTGGGGTCAATTTGGCATCATAAGGGCATGCTCTGACAGGTTGACAGGAGAGGTTTTGGCCTGCAAATCTATTGCTAAAGATAGGTTGGTTACTTTGGATGATCTGAGGAGTGTGAAACTTGAGATTGAGATAATGGCTAGGTTATCTGGGCATCCAAATGTTGTTGATCTCAAGGCAGTGTATGAAGAGGAAGGTTTTGTTCATTTGGTGATGGAGCTCTGTGCAGGAGGGGAGTTGTTTCACCGATTAGAGAAGCATGGACGGTTTTCTGAATCGGAAGCCAGGGTTATCTTTAGGCACCTAATGCAGGTTGTCTTGTATTGTCATGAAAACGGGGTTGTTCATAGAGATTTGAAGCCTGAAAACATTCTCTTAGCAACAAAAGCCTCCTCATCTCCAATTAAATTGGCCGATTTTGGGCTTGCAACCTACATAAAACCTGGACAGAGTTTGCACGGGTTAGTCGGGAGTCCATTCTATATAGCTCCAGAGGTACTAGCTGGTGCATATAATGAAGCTGCTGATGTATGGAGTGCAGGGGTTATTCTTTACATTCTGTTGAGTGGGATGCCTCCTTTTTGGGGGAAAACCAAATCACACATATTTGAAGCTGTTAAGGCAGCTGCCCTGAGATTCCCATCGGAACCTTGGGATCGCGTTTCTGAGTCAGCTAAAGATTTGATCAAGGGAATGCTGTGTACAGAACCTTCTCTAAGGCTCACTGCCCAGGAGGTTTTAGATCATTGCTGGATGGAAAGCAATCAAACAATTCCTGAACAACTAAGTGAACATAATACCCAAAGTTGTGAAGAAAGGGATGTTGGTGGCAGCTCATTCTCTGCCTCTTTTATGTCCAGGAATCAGGACATCAGCTTCGGCACCGGATCACCTATTTGTGATGCTCAATCACCTACATTCACATGCAGATCATCATTTTCGTCTTTTCTGGGAGAACCAGTGACTCCTTGTTTAGTTTCTGGTGGGTTTTCCTTTCAGAGCATGGGCGATTCCCTGGAATTTGCTTCACCTGTTCCCTCAATGCTCAGCTTTTCATTTCTGAGCCCCAGTTCTGTTGTTGAGCTAAAGAGCTGTAAATTAGAGGGCTCAAATAACATGTCAGATGTAAATGCAATTGCTAGAGAAACAAGCTTGGGGAAGTTGCTTTTACCACCAGACTCTCCCCATTGTGTTGGACATGATGTTAAAGAAATGGATCACAAGCCTGCAGAGAATAAAAGGGCTGGTGGGATGAATGGACATAGAGTATTGGGAATCCACAGTAAGAGAAACAGGACAATTGGACTTGGTGATTGTGTACAACTTGACCTTGTGGTGAATGAATCAGTCATCCGTTGGTTATCTTGCACTCAACTGCCTACATCTTTGAGATCATCTCTTGTCTGCTGA 1551 0.4384 MAVAKSSSCIEPCTSYNCYKVAGLTETILDANYTSNLKDRYILGEQLGWGQFGIIRACSDRLTGEVLACKSIAKDRLVTLDDLRSVKLEIEIMARLSGHPNVVDLKAVYEEEGFVHLVMELCAGGELFHRLEKHGRFSESEARVIFRHLMQVVLYCHENGVVHRDLKPENILLATKASSSPIKLADFGLATYIKPGQSLHGLVGSPFYIAPEVLAGAYNEAADVWSAGVILYILLSGMPPFWGKTKSHIFEAVKAAALRFPSEPWDRVSESAKDLIKGMLCTEPSLRLTAQEVLDHCWMESNQTIPEQLSEHNTQSCEERDVGGSSFSASFMSRNQDISFGTGSPICDAQSPTFTCRSSFSSFLGEPVTPCLVSGGFSFQSMGDSLEFASPVPSMLSFSFLSPSSVVELKSCKLEGSNNMSDVNAIARETSLGKLLLPPDSPHCVGHDVKEMDHKPAENKRAGGMNGHRVLGIHSKRNRTIGLGDCVQLDLVVNESVIRWLSCTQLPTSLRSSLVC* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2535 516 Pfam Protein kinase domain 43 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g2535 516 CDD STKc_CAMK 40 298 - -
Lja2g2535 516 ProSitePatterns Protein kinases ATP-binding region signature. 47 74 IPR017441 GO:0005524
Lja2g2535 516 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Lja2g2535 516 ProSiteProfiles Protein kinase domain profile. 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g2535 516 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 34-LIKE 13 509 - -
Lja2g2535 516 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Lja2g2535 516 Gene3D Transferase(Phosphotransferase) domain 1 128 332 - -
Lja2g2535 516 SUPERFAMILY Protein kinase-like (PK-like) 38 364 IPR011009 -
Lja2g2535 516 PANTHER SERINE/THREONINE-PROTEIN KINASE 13 509 - -
Lja2g2535 516 SMART serkin_6 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2535 Lja-Chr2 33302145 33305502 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2535 28 306 EF-hand Containing Proteins AT3G57530 48.746 2.68e-97 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lja2g2535 Pkinase 1.6e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2535 - - gmx:100776088 866.685