Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2498 ATGTGCAGGGGTGACATCTCCTCTCAACTGTGTCAACTATGCGTCACAAACGCAACCCAGCGACTATCCTCAGAGTGCTCCTTGTCCAAACAAGCTGTTATTTGGTACGACGAGTGTATGGTTCGCTACTCCAATCGCTCTTTCTTCTCTACTGTGGTTACTCAGCCAGGACTTTTCATGTGGAGGAACTCAGCTAATATCTCAAACCCAGAAAGCTTCAAGCATTTGTTGTTTAAGACCATGAATGCAACTGCAGATGAAGCAGCCAGAGGTGATGAGAAGATTAAGTTTGCCACAAGGGAAGCAACTGTCTCAGATTCTCAGGACCTTTACTGTCTAGCTCAGTGCACACCAGATTTGTCACCCGGTGATTGCAGAACATGTCTTAGTGTGGCGATAGAACAACTTCCTATGTGCTGTGAAGGAAAGCAGGGAGGTACAGTTCTATATCCAAGCTGTAATATTAGGTATCAATTGTACCCTTTCTATAACACCATTTCTCCATCACCCACTCCTTCACTTGTTCCCGCCACAACAAATAACACTTCCCGTGGTGATGATTCTGAATTATCACCAAATCCTATCTATCTCTCTCACAATTGCTCAAGTGACCAAACCTCCCATGCTTTCCAAATTTACATCAAGACCCTCCTCTCTTACATGTCTTCCAACGCCACCAGCGGCCAGGAGAAGCATCAAGAGCTTGATGTGAACGGCATCGTATATGGCCTCTTCTTGTGCCGGGGCGATGTTTCCTCTGGCCTATGCGGACAATGCATCCTAAACGCAACGGATCGAATATTATCAGAATGTCACTCCTTTCAAGAGGCTATAATTTGGTACAGCCAATGCACTCTTCGATATTCCAATCGGGAGTTCTTTTCCACAGCGGACACAAGTCCAAAATATTCTGAGTTGAATATCACCAGTTCTTCAAGCCTCACCCCGAACCAAAACTTCTTCAGTGTCACATTATCAAACAACTTAGCTCAAATTGCGAATGTCACAGGAAAATGTTTAGGTAGATATCTAACAAGATCAATGAAACTGAATGATTTACAAACTCTGTATGCTCTTGGCCAATGTACGCCAGATTTGTCCAGTGATGGTTGCAAGAGCTGTTTGCAAGATGTGATTGGAACATCAATTCCCTGGTCTCGATTGGGAAGCGTAGGGGGAAGAGTTATGTACCCAAGCTGTAATATGAGGTTTGAATTGTTCAAATTTTACAGGGTTGACGGTGATGACGAAGCTCAGCCACCATCAGGACCTACTGGTAGTGGGAAAAAAAGTAACCGAAGGCGAACTATTATCTTAATTGTTGTGCCTACAATTATTTCAGTAATACTCCTTTCCTTTGGTTACTATTTGCTAAAGGGAAAAGCTCGAAAGAGTCCTACCACAATTCTGAAAGAAAATTTTGGTAATGAAAGTGCAACTTTAGAGCCATTGCAATTAGATTTTTCGGTAATTGAAGCAGCAACCAACTACTTTTCTGATGGCAATTACATTGGCAAAGGTGGATTTGGAAAGGTTTATAAGGGTATTCTTCAAGATGGACGACAAATAGCTGTGAAGAGACTTTCAGAAAGTTCTAAGCAAGGTGTTGACGAGTTCAAGAACGAAGTTTTATTGATAGCAAAGCTTCAACACAGAAATCTTGTGGCATTCGTTGGCTTTTGTCTTGAGGAACAAGAGAAAATACTCATTTACGAATATGTGCCAAACAAGAGTCTTGATTACTTTTTATTCGATTCTCAAGGGCAATATCCATTACGTTGGGATGAACGTTATAATGTTATTGGAGGGATTGCTCGAGGAATTGTTTATTTACATGAGCATTCACGGCTTAAAGTCATTCATCGTGATCTAAAACCCAGCAATGTTTTGTTAGATGAAAATATGATTCCAAAAATTTCAGATTTTGAATATGCAATGCATGGAGAATTTTCAGATAAATTAGATGTTTTCAGTTTTGGAATCATGATTTTAGAGATTGTCACCGGGAAAAAGAATCTAAGTTCTGATGTTTGGAGACAATGGAAGGATGAAACACCTATTAGTATATTGGACCAAAATATCAAAGAAAATTATTCTAATATTGAGGTCATCAGATGCATTCAGATTGGCCTATTATGTGTTCAACATAACCCTGATGCTAGACCTACAATGACAGAAATTGTTTCATATCTTAGCAGTTATTCAGCTGATTTGCCAACTCCACAAGAACCTACAATTTTCTTACACAAAAGGATGGATCCAAAAGCACTTCTTCAAGTATCGAGTTATATTAAATCTGGAAATAATTCTGTCAATGAAGTGTCTCTAGCTAAGTACTTTTCTTCCCCGGTAGTAATTAGTTGA 2364 0.4002 MCRGDISSQLCQLCVTNATQRLSSECSLSKQAVIWYDECMVRYSNRSFFSTVVTQPGLFMWRNSANISNPESFKHLLFKTMNATADEAARGDEKIKFATREATVSDSQDLYCLAQCTPDLSPGDCRTCLSVAIEQLPMCCEGKQGGTVLYPSCNIRYQLYPFYNTISPSPTPSLVPATTNNTSRGDDSELSPNPIYLSHNCSSDQTSHAFQIYIKTLLSYMSSNATSGQEKHQELDVNGIVYGLFLCRGDVSSGLCGQCILNATDRILSECHSFQEAIIWYSQCTLRYSNREFFSTADTSPKYSELNITSSSSLTPNQNFFSVTLSNNLAQIANVTGKCLGRYLTRSMKLNDLQTLYALGQCTPDLSSDGCKSCLQDVIGTSIPWSRLGSVGGRVMYPSCNMRFELFKFYRVDGDDEAQPPSGPTGSGKKSNRRRTIILIVVPTIISVILLSFGYYLLKGKARKSPTTILKENFGNESATLEPLQLDFSVIEAATNYFSDGNYIGKGGFGKVYKGILQDGRQIAVKRLSESSKQGVDEFKNEVLLIAKLQHRNLVAFVGFCLEEQEKILIYEYVPNKSLDYFLFDSQGQYPLRWDERYNVIGGIARGIVYLHEHSRLKVIHRDLKPSNVLLDENMIPKISDFEYAMHGEFSDKLDVFSFGIMILEIVTGKKNLSSDVWRQWKDETPISILDQNIKENYSNIEVIRCIQIGLLCVQHNPDARPTMTEIVSYLSSYSADLPTPQEPTIFLHKRMDPKALLQVSSYIKSGNNSVNEVSLAKYFSSPVVIS* 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2498 787 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Lja2g2498 787 Gene3D Transferase(Phosphotransferase) domain 1 574 644 - -
Lja2g2498 787 Gene3D Transferase(Phosphotransferase) domain 1 645 743 - -
Lja2g2498 787 Pfam Protein kinase domain 500 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g2498 787 ProSiteProfiles Gnk2-homologous domain profile. 192 293 IPR002902 -
Lja2g2498 787 ProSiteProfiles Gnk2-homologous domain profile. 55 162 IPR002902 -
Lja2g2498 787 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 427 642 - -
Lja2g2498 787 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 643 777 - -
Lja2g2498 787 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 643 777 - -
Lja2g2498 787 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 1 174 - -
Lja2g2498 787 SMART serkin_6 498 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g2498 787 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 174 - -
Lja2g2498 787 ProSitePatterns Protein kinases ATP-binding region signature. 504 526 IPR017441 GO:0005524
Lja2g2498 787 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 190 414 - -
Lja2g2498 787 Gene3D - 1 48 IPR038408 -
Lja2g2498 787 Gene3D - 58 162 IPR038408 -
Lja2g2498 787 Gene3D - 193 293 IPR038408 -
Lja2g2498 787 Gene3D - 302 409 IPR038408 -
Lja2g2498 787 Pfam Salt stress response/antifungal 324 405 IPR002902 -
Lja2g2498 787 Pfam Salt stress response/antifungal 205 290 IPR002902 -
Lja2g2498 787 Pfam Salt stress response/antifungal 66 159 IPR002902 -
Lja2g2498 787 Pfam Salt stress response/antifungal 1 45 IPR002902 -
Lja2g2498 787 SUPERFAMILY Protein kinase-like (PK-like) 482 754 IPR011009 -
Lja2g2498 787 ProSiteProfiles Gnk2-homologous domain profile. 302 409 IPR002902 -
Lja2g2498 787 ProSiteProfiles Protein kinase domain profile. 498 735 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g2498 787 Gene3D Phosphorylase Kinase; domain 1 462 573 - -
Lja2g2498 787 ProSiteProfiles Gnk2-homologous domain profile. 1 48 IPR002902 -
Lja2g2498 787 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 427 642 - -
Lja2g2498 787 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 190 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2498 Lja-Chr2 32289131 32292396 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2498 190 755 Receptor kinase-like Gene Family AT4G05200 39.841 3.59e-148 448
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lja2g2498 Pkinase 4.3e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2498 - - gmx:100798426 964.911