Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2493 ATGGAGTGCAATAAGGATGAGGCCACCAGAGCTAAAGAAATTGCTGAGAGGAAGTTTATTGCAAAGGACACTTTGGGTGCAAAAAAGTTTGCTTTGAAAGCTCAAAATTTATTTCCTGCCCTTGAGGGTATTCCTCAGCTGATAGCAACACTTGATGTATATATTTCTGCCGAGAACAAAATAAATGGAGAAACAGATTGGTATGGTATACTTGGTGCAAACCCCTATGCCGATGATGATACAGTCAGGAAACACTACAGGAAGCTAGCTCTCATGCTTCACCCTGACAAGAACAAATCTGTTGGGGCTGATGGGGCATTTAAACTTATATCCGAGGCATGGAGTTTACTTTCAGATAAGTCTAGACGGGCAGCTTATGATGATAAGAGAAAGGGAAAAGCACGGAAAGATTCAACTATGTTCGGTGGTTCATCAGCAAAAAAAGGGGCTAATGGAAGTTTCAATTTTACTAAGACTACCTCTTCAAGTGCAAAGACTCAGAAGAATACTGCTAAAGAAAACACTTCATCTTCTACCCATAAGTCAAAACCAACATTTTGGACTACTTGCAATCGTTGCAAAATGCAGTATGAGTATCTTAAAGTTTATCTTAACCTTAAACTCTTGTGTCCCAACTGCAATGAGGCATTTTTGGCTAAAGAAACGGAGCCACCTCCTGCAAGTGGTATTAGACCTGGAGCATCATGGAGTTTTTCAAAAAACCAGCAAAAGTTCAATGGCCAAGCACCTAATAAAAGCAAATCTAGTGCTGGAAATAGCAATACCAGTTTCCAGTGGACTCCGTTTTCAAAAACTTCTGGTGTTTCTAATGCGGCTCAAGCTGCAAATGTGGTTCAGCAGGCATATCACAAGGTGAAGCGAGATCGTGAGGAGGCACAAGCAGCTACCAAAAGGGAAGAGGCCTTAAAAAGGAAGCAAAATGTTTCTAGAAAAGGTTACTTTAATCCAGCCAAGAGAAGAAAGGGGGGCATGGAGGAACCAGTTAATCAAATGGGTAGAAAAGGTAGTTTTGGATATAATGGGGATGTCTCCCTGATTGAACTTCAGAATCTGCTGATGGAGAAAGCTAGAAAAGAAATTAGCAAGAAACTCAAGGAAACTCAGTCAAATACTGTTAATAAATCGGTGGTGAAAGAGAGTGGAAATTGCTTCCAGAAAGCTAATGAGAACAGAGAAAAATCTGTAAGAAATTTTGAGACGTGTGCTCAAAATAACATTGGAAAGTCAGAAGATAGACAGAGTGGATTGCTAGTAGAAATCAGTACAAACTTTTTGGATGCAATGCTAGTAGATGTTCCAGATCCTGATTTCCATGATTTTTACAAGGATCGAACTGAAAGATCTTTTGGTGAAAATCAAAATCAAATATGGGCTGCTTATGATCATGATGATGGGATGCCTCGATGTTATGCAATGGTCCACAACGTGATCTCTTTGAATCCATTCAAGATACAGATCAGTCTGCTCAATCCAAATACCAACAGTGAACTGGGCTCTCTAAATTGGGTTGCTTCAGGCTTTTCAAAAACTTGTGGGGATTTCAGAATAGGTAGACATGAAATCTGTAACTCGATACATTTTTTTTCTCACAAGGTTAGGTGGAGAGAAGGTAATGACGGAGCCATTCGTATATATCCCAGAAAAGGGGATATTTGGGCCATCTATAGGAACTGGTCTCCTGACTGGAATGAGCTAACAGCAGATGAGGTTATGCACAAGTTCGATGTTGTTGAAGTACTTGAGGATTTTAGCGAAGAACATGGTGTTACTATTATTCCTCTGGTCAAGGTGGCTGGGTTCAAGACAGTATTTCACCACCACATAGATCCAAGAGAAATCAGAGTTATTCCAAGGGAAGAGATGCTTCGGTTCTCTCATCAGGTACCTTCATGCTTGCTTACTGGTCTAGAAGCTCAGAATGCTCCAAAGGGTTGCAGAGTGCTGGACCCAGCTGCTACTCCGTTTGAACTTCATCAGGTAATAGAAGTTGTGGAGGAGGAATACATGGTGGACAATGGGGATGGTGTTATGAAAGAAACATGTGATAAAAACAAAGAAGCCAGTTGTGAGCAATTGATCAGTGATGTGGGAAAACATGGGGAAGGAAAGGAGGGAAAGAGTAAAGATATCCAGGAAATAGAAATATTGAAAGAGCAAGGAGGGTGTTTAGCATGTTAA 2199 0.4065 MECNKDEATRAKEIAERKFIAKDTLGAKKFALKAQNLFPALEGIPQLIATLDVYISAENKINGETDWYGILGANPYADDDTVRKHYRKLALMLHPDKNKSVGADGAFKLISEAWSLLSDKSRRAAYDDKRKGKARKDSTMFGGSSAKKGANGSFNFTKTTSSSAKTQKNTAKENTSSSTHKSKPTFWTTCNRCKMQYEYLKVYLNLKLLCPNCNEAFLAKETEPPPASGIRPGASWSFSKNQQKFNGQAPNKSKSSAGNSNTSFQWTPFSKTSGVSNAAQAANVVQQAYHKVKRDREEAQAATKREEALKRKQNVSRKGYFNPAKRRKGGMEEPVNQMGRKGSFGYNGDVSLIELQNLLMEKARKEISKKLKETQSNTVNKSVVKESGNCFQKANENREKSVRNFETCAQNNIGKSEDRQSGLLVEISTNFLDAMLVDVPDPDFHDFYKDRTERSFGENQNQIWAAYDHDDGMPRCYAMVHNVISLNPFKIQISLLNPNTNSELGSLNWVASGFSKTCGDFRIGRHEICNSIHFFSHKVRWREGNDGAIRIYPRKGDIWAIYRNWSPDWNELTADEVMHKFDVVEVLEDFSEEHGVTIIPLVKVAGFKTVFHHHIDPREIRVIPREEMLRFSHQVPSCLLTGLEAQNAPKGCRVLDPAATPFELHQVIEVVEEEYMVDNGDGVMKETCDKNKEASCEQLISDVGKHGEGKEGKSKDIQEIEILKEQGGCLAC* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2493 732 Pfam Domain of unknown function (DUF3444) 436 642 IPR024593 -
Lja2g2493 732 MobiDBLite consensus disorder prediction 152 183 - -
Lja2g2493 732 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Lja2g2493 732 MobiDBLite consensus disorder prediction 295 314 - -
Lja2g2493 732 Pfam DnaJ domain 66 127 IPR001623 -
Lja2g2493 732 PANTHER BNAA04G14940D PROTEIN 1 666 - -
Lja2g2493 732 MobiDBLite consensus disorder prediction 234 262 - -
Lja2g2493 732 MobiDBLite consensus disorder prediction 127 146 - -
Lja2g2493 732 MobiDBLite consensus disorder prediction 222 262 - -
Lja2g2493 732 CDD DnaJ 66 119 IPR001623 -
Lja2g2493 732 Gene3D DnaJ domain 63 181 IPR036869 -
Lja2g2493 732 PRINTS DnaJ domain signature 68 86 IPR001623 -
Lja2g2493 732 PRINTS DnaJ domain signature 102 122 IPR001623 -
Lja2g2493 732 PRINTS DnaJ domain signature 86 101 IPR001623 -
Lja2g2493 732 SMART dnaj_3 65 122 IPR001623 -
Lja2g2493 732 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Lja2g2493 732 SUPERFAMILY Chaperone J-domain 59 126 IPR036869 -
Lja2g2493 732 PANTHER BNAC03G44070D PROTEIN 1 666 - -
Lja2g2493 732 Coils Coil 292 312 - -
Lja2g2493 732 MobiDBLite consensus disorder prediction 295 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2493 Lja-Chr2 31877414 31879612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2493 4 329 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.473 1.83e-33 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2493 - - lja:Lj2g3v0520120.1 1452.96