Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2487 ATGGCTTCCCTTGGCATGTCAGAAATGCTTGGAAACGCCATCAACTTCGGTGGCGCCACCAGGTCAGCACCATCTCCCTCTAGCCCCGCCACCTTCAAGACAGTGGCTCTTTTCTCCAAGAAGAAGCCAGCACCAAAGCAGAAACCTGTTGCTGTTGCTCCTGCTGACGAGGAACTCGCCAAGTGGTATGGTCCTGACAGAAGGATCTTCTTGCCTGATGGACTCTTGGACCGATCTGAGATCCCAGAGTACTTGACTGGAGAAGTCCCCGGAGACTATGGTTATGACCCATTTGGTCTTGGCAAGAAGCCAGAGGACTTCGCCAAATATCAGGCATTTGAATTGATTCACGCCAGATGGGCGATGCTTGGTGCTGCCGGATTCATCATTCCTGAGGCCTTAAACAAATATGGAGCCAACTGTGGTCCTGAGGCTGTTTGGTTCAAGACCGGAGCTCTTCTTCTTGATGGGAATACGTTGAACTACTTTGGCAAACCCATCCCCATCAATCTCGTTGTTGCTGTCGTTGCTGAGGTTGTTCTTTTGGGAGGTGCAGAGTACTACAGAATTACTAATGGACTGGATTTCGAAGACAAGCTTCATCCAGGCGGTCCATTCGACCCGTTGGGGCTTGCAAAGGATCCGGACCAGGCTGCGCTGCTGAAGGTGAAGGAAATCAAGAACGGCAGACTTGCTATGTTTTCCATGCTTGGTTTCTTCATCCAAGCTTATGTGACCGGAGATGGTCCTGTTGAGAACCTTGCAAAACATCTCAGTGACCCTTTTGGCAACAACTTGCTCACAGTCATTGCCGGGAATGCTGAGAGAGCTCCAACTCTGTGA 843 0.5053 MASLGMSEMLGNAINFGGATRSAPSPSSPATFKTVALFSKKKPAPKQKPVAVAPADEELAKWYGPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKPIPINLVVAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGDGPVENLAKHLSDPFGNNLLTVIAGNAERAPTL* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2487 280 Pfam Chlorophyll A-B binding protein 82 243 IPR022796 -
Lja2g2487 280 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 280 IPR001344 GO:0009765|GO:0016020
Lja2g2487 280 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 2 280 - -
Lja2g2487 280 Gene3D Chlorophyll a/b binding protein domain 69 280 - -
Lja2g2487 280 SUPERFAMILY Chlorophyll a-b binding protein 62 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2487 Lja-Chr2 31787493 31790575 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2487 1 280 Chloroplast and Mitochondria Gene Families AT4G10340 87.189 1.71e-158 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2487 K08916 - twl:119991788 493.426