Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2469 ATGAAGATAAATTCTCCCCTTCTAGCTTGTTTGGCAGTGTTTTGTTTCCTTGGGGTTTGTCAAGGAGGCAGCCTCAGGAAACAATTCTACAGGAAATCATGTTCTCAAGCAGAGCAGATTGTTAAGACCACAATCCAGCAACATGTCTCTTCAAGGCCTGAACTGCCAGCAAAGTTGCTTAGAATGCATTTCCATGATTGTTTTGTCAGGGGTTGTGATGGCTCGGTTCTGCTGAACTCCACTGCCGGTAACACTGCAGAGAAGGATGCCATTCCTAATTTGTCTTTGTCTGGTTTTGATGTCATAGATGAGATAAAAGAAGCATTGGAGGCAAAGTGTCCCAAAATTGTATCTTGTGCTGACATACTGGCATTGGCAGCCAGAGATGCTGTTTCTGTTCAATTTAATAATGAGCCCAAGTGGGAAGTTCTAACCGGCAGAAGAGATGGCACAGTATCCAAAAGTAGTGAAGTCCTGACCAATATCCCAGCACCTTTCTTCACCTTCACACAGCTCAAACAAAGCTTTGAAAGCAAAAAGCTTACTCTGCACGACATGGTTGTACTATCAGGAGGACACACAATTGGAGTAGGTCATTGCAACTTGTTCAGCAACAGGCTTTACAACTTCACTGGAAAAGGAGATCAAGATCCTTCTTTGAATCCCACTTATGCTGAGTTCTTAAAGACCAAGTGCAAAAGCCTCAGTGACACCACCACAACAGTAGACATGGATCCTAATAGTGGTACCACATTTGACAGTAACTACTACTCCATCCTTCTCCAGAACAAGGGTATGTTCCAATCAGACGCTGCACTTCTAGCAACCAAGCAGTCGAAAAAAATTGTTAATGAATTGGTTGGGCAAAACAAATTCTTCACAGAGTTTGGCCAGTCAATGAAGAGGATGGGAGCCATTGAGGTCCTCTCAGGCACGGCTGGGGAAATTAGGAGGAAGTGCTCTGTTGTCAACTCTTAA 978 0.4376 MKINSPLLACLAVFCFLGVCQGGSLRKQFYRKSCSQAEQIVKTTIQQHVSSRPELPAKLLRMHFHDCFVRGCDGSVLLNSTAGNTAEKDAIPNLSLSGFDVIDEIKEALEAKCPKIVSCADILALAARDAVSVQFNNEPKWEVLTGRRDGTVSKSSEVLTNIPAPFFTFTQLKQSFESKKLTLHDMVVLSGGHTIGVGHCNLFSNRLYNFTGKGDQDPSLNPTYAEFLKTKCKSLSDTTTTVDMDPNSGTTFDSNYYSILLQNKGMFQSDAALLATKQSKKIVNELVGQNKFFTEFGQSMKRMGAIEVLSGTAGEIRRKCSVVNS* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2469 325 Gene3D Peroxidase, domain 2 163 303 - -
Lja2g2469 325 ProSiteProfiles Plant heme peroxidase family profile. 24 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g2469 325 SUPERFAMILY Heme-dependent peroxidases 25 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja2g2469 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Lja2g2469 325 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g2469 325 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g2469 325 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g2469 325 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g2469 325 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g2469 325 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g2469 325 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g2469 325 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g2469 325 CDD secretory_peroxidase 25 323 IPR033905 GO:0004601|GO:0042744
Lja2g2469 325 PANTHER PEROXIDASE 25-RELATED 7 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g2469 325 Pfam Peroxidase 41 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g2469 325 Gene3D - 28 324 - -
Lja2g2469 325 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g2469 325 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g2469 325 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g2469 325 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g2469 325 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g2469 325 PANTHER PEROXIDASE 7 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2469 Lja-Chr2 31243638 31245452 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2469 25 325 Peroxidase AT1G05260 54.934 3.03e-119 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2469 K00430 - gsj:114405310 541.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2469 2 31243638 31245452 Lja2g2469 2 31243638 31245452 ECH